Gene detail information of Glyur002262s00035126.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10240.1 | 6.00E-166 | FAR1-related sequence 11 |
| NR | XP_006597714.1 | 0 | PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Glycine max] |
| Swissprot | tr|Q9SY66|FRS11_ARATH | 0 | Protein FAR1-RELATED SEQUENCE 11 |
| trEMBL | tr|I1MGI3|I1MGI3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02262 | 10007 | 14619 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002262s00035126.1 | PF03101.10 | FAR1 | 59 | 152 | 8.90E-19 |
| Glyur002262s00035126.1 | PF04434.12 | SWIM | 494 | 517 | 1.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.559 |
| SRR1783600 | control | 10.623 |
| SRR1783602 | moderate drought stress | 8.472 |
| SRR1811619 | moderate drought stress | 8.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.699 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.430 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.692 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.925 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.986 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.070 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 12.596 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.450 |
| SRR2967015 | Control (Tissue:root) | 14.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.931 |
| SRR9715740 | Leave | 10.285 |
| SRR9715741 | Leave | 8.864 |
| SRR9715739 | Root | 4.105 |
| SRR9715742 | Root | 6.936 |
| SRR9715743 | Root | 6.079 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.853 |
| SRR8749028 | MeJA induced 9h | 10.779 |
| SRR8749029 | MeJA induced 9h | 7.494 |
| SRR8749030 | Uninduced | 8.612 |
| SRR8749031 | Uninduced | 5.371 |
| SRR8749032 | Uninduced | 5.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.112 |
| SRR8400027 | Control-Root | 11.939 |