Gene detail information of Glyur002262s00035134.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G16110.11.00E-137response regulator 2
NRXP_003546340.10PREDICTED: two-component response regulator ARR2-like isoform X1 [Glycine max]
COGYP_462742.12.00E-14sigma-54-dependent transcriptional regulator [Syntrophus aciditrophicus SB]
Swissprottr|Q9ZWJ9|ARR2_ARATH0Two-component response regulator ARR2
trEMBLtr|I1MGI9|I1MGI9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G15520.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022624129145076-


Gene family

Gene familysubfamily
Transcription Factors FamilyARR-B


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system


molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002262s00035134.1PF00072.19Response_reg391472.70E-21
Glyur002262s00035134.1PF00249.26Myb_DNA-binding2182682.50E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.364
SRR1783600control13.400
SRR1783602moderate drought stress13.186
SRR1811619moderate drought stress13.434

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.572
DRR006520Root Summer glycyrrhizin high producing strain8.537
DRR006521Root Winter glycyrrhizin high producing strain6.471
DRR006522Root Winter glycyrrhizin high producing strain6.199
DRR006523Root Summer glycyrrhizin low producing strain17.770
DRR006524Root Summer glycyrrhizin low producing strain17.914
DRR006525Leaf Summer glycyrrhizin high producing strain1.724
DRR006526Leaf Summer glycyrrhizin high producing strain1.787

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.230
SRR2868004Drought Stress(Tissue:root)32.700
SRR2967015Control (Tissue:root)37.319

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.993
SRR9715740Leave5.957
SRR9715741Leave8.411
SRR9715739Root4.981
SRR9715742Root15.134
SRR9715743Root12.847

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.819
SRR8749028MeJA induced 9h9.204
SRR8749029MeJA induced 9h3.141
SRR8749030Uninduced5.235
SRR8749031Uninduced2.551
SRR8749032Uninduced1.987

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.727
SRR8400027Control-Root28.419

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved