Gene detail

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Gene detail information of Glyur002268s00033548.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G38280.1	3.00E-75	PR5-like receptor kinase
NR	AES59896.2	0	stress-induced receptor-like kinase [Medicago truncatula]
COG	YP_001958461.1	5.00E-23	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|D7SFH9\|GPDL2_ARATH	9.00E-86	Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBL	tr\|G7I976\|G7I976_MEDTR	0	Stress-induced receptor-like kinase {ECO:0000313\|EMBL:AES59896.2}

Sequence

Transcript Sequence

>Glyur002268s00033548.1
ATGTCACTCTTTGCAGCATTATTACGATTACGCATAATCCTTGTGGTGCTGTTACTAACCATTGTCATATACAAGGGAAGTGGTAGCTCAGATATTGCTCCACAGTTACAGGACTGTTCTAGATGGTGCGGGGTCCACAACGTAAGCCACCCTTTTCGGCTGAGAGACAGTCCAGACAAGTGTGGTGACCAGAGGTATAACCTATCTTGCGAGGCCAACCAACAGTTGGTTCTGCATTTGGGAAATAATGGGAAATACTATGTGCAGTCAATTAATTACAACAACTTCACAATACGACTCGTGGATGCCAATCTTTCACTCCTTCAATATTCCACTAATTATTCCCTCCCTCCTTATTCATTAGGCATCTACAATTTGAGTGACATATATTATGATGACCCGTACAAAATGTATCAGTACTCCGCGGGGAATATGTTGGTGAAGTATATGGTATTGGTGAGGTGTCCGAATCGGGTGGATTCCTCTGGTAGTCAGCACTTTGACATCGACGGTGCTACTATTTGTATGAATACTAGTTCCTATGCGCAGGGGATTTCTCTCTACGTCGTTAATGGTGACGAATCTCTTGGGGATTTGGGGCTGGGAGACACGTGTCGTATTGAGTTCATGTATCTCACATCGTGGCCTGTTGAAATCTTCCAAGGCAGAGGCAACAACATGTCATGCACAGACATCCGCCGTATGCTGTTTTATGGGTTCGAACTTTCTTGGATTAACAGTCTTTGTGAAGATGGTCGGTATGTCCGGCAGATCGATGGCAATCACCAGCCTCGTTTATTGGACAATGACCTAAAGAACGGGGCACCAGACATCAAGAAGATAACAGAACAATTCAAGACAAAACTTGGGAACGGAGGCTTTGGCTCTGTCTTCAAAGGAAAACTTCGAAGTGGCCGTCTCGTAGCGGTCAAGGTACTGTTGGACAAAGCCAAATCCAACGGTCAAGATTTCATCAATGAAGTCACCACCATCGGTAGGATTCACCATGTCAATGTGGTGCAGCTCATTGGCTTTTGTGTTGAGGATCAAAACTTCATGCCAAATGGGTCTCTCGAAAAACACATCTTTTCTTCTCATCATGAAGAGGGTCATACTCGTCCTAATTCCTTGAGTTGCGAAAAATTGTACTCCATTTCTCTTGGAGTGGCTCGAGGCATTGAGTATTTACATAATGGTTGCAACATGAAAATCTTGCACTTTGACATAAAGCCTCATAACATCCTTCTTGATGAGAATTTCAATCCAAAGGTCTCTGATTTTGGACTTGCAAGGCTCTGTCCCACTGATAACAGCATTGTGTCATTGACAGCAGCAAGAGGAACCATAGGCTACATGGCTCCTGAGTTGTTCTATAGAAATGTTGGAACGGTCTCATACAAAGCTGATGTGTATAGTTTTGGGATGTTATTGATGGAGATGGCCAGTAAAAGGAAGAACTTGAATGCATTGGCTGAGCAATCTAGCCAGATTTATTTCCCTTTCTGGGTTTATGATCGGTTGCGTGATGGAAGGGAAGTAATAACAACAACATCAATTGAAAATGATGGCGTAGATGATGATGATGAGGAAATGAATAAGTCGGCAATGAAAATGATGCTGGTGGCGTTGTGGTGTATACAGACAAGGCCTGGTGATCGTCCTTCGATGCATAGAGTGTTGGAGATGCTGGAAGAAGAAGATGAGGAATTACAATTGCCTAATAAGCCTTACCTATTCCCAGAAGATCTACCCGAAGAGGATGTTAGAGATGATGATGGTACTATTAGCAGCTCATGGCCTTCCTCTGCTACATCAATACGTGATTCCAAGGAATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02268	33117	38711	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002268s00033548.1	PF13947.1	GUB_WAK_bind	37	104	1.30E-07
Glyur002268s00033548.1	PF00069.20	Pkinase	285	561	1.90E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.177
SRR1783600	control	0.170
SRR1783602	moderate drought stress	0.012
SRR1811619	moderate drought stress	0.010

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.029
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.029
DRR006523	Root Summer glycyrrhizin low producing strain	8.146
DRR006524	Root Summer glycyrrhizin low producing strain	8.479
DRR006525	Leaf Summer glycyrrhizin high producing strain	27.670
DRR006526	Leaf Summer glycyrrhizin high producing strain	28.403

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.160
SRR2868004	Drought Stress(Tissue:root)	2.956
SRR2967015	Control (Tissue:root)	0.631

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	148.627
SRR9715740	Leave	127.601
SRR9715741	Leave	188.512
SRR9715739	Root	0.347
SRR9715742	Root	0.842
SRR9715743	Root	0.900

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.346
SRR8749028	MeJA induced 9h	1.089
SRR8749029	MeJA induced 9h	0.643
SRR8749030	Uninduced	0.710
SRR8749031	Uninduced	1.452
SRR8749032	Uninduced	0.694

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.487
SRR8400027	Control-Root	1.343