Gene detail information of Glyur002275s00030377.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G25760.10Protein kinase family protein
NRAES58679.20casein kinase I-like protein [Medicago truncatula]
COGYP_005321927.12.00E-15peptidase c14 caspase catalytic subunit p20 [Saprospira grandis str. Lewin]
Swissprottr|P42158|KC1D_ARATH4.00E-57Casein kinase I isoform delta-like
trEMBLtr|G7I261|G7I261_MEDTR0Casein kinase I-like protein {ECO:0000313|EMBL:AES58679.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold022752286830676+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002275s00030377.1PF00069.20Pkinase1443991.70E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.664
SRR1783600control21.332
SRR1783602moderate drought stress25.833
SRR1811619moderate drought stress25.534

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.753
DRR006520Root Summer glycyrrhizin high producing strain22.264
DRR006521Root Winter glycyrrhizin high producing strain24.836
DRR006522Root Winter glycyrrhizin high producing strain24.000
DRR006523Root Summer glycyrrhizin low producing strain26.049
DRR006524Root Summer glycyrrhizin low producing strain25.503
DRR006525Leaf Summer glycyrrhizin high producing strain11.211
DRR006526Leaf Summer glycyrrhizin high producing strain10.976

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.673
SRR2868004Drought Stress(Tissue:root)24.622
SRR2967015Control (Tissue:root)20.729

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.410
SRR9715740Leave18.275
SRR9715741Leave19.654
SRR9715739Root3.705
SRR9715742Root19.232
SRR9715743Root16.703

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.196
SRR8749028MeJA induced 9h11.800
SRR8749029MeJA induced 9h7.667
SRR8749030Uninduced8.417
SRR8749031Uninduced6.810
SRR8749032Uninduced7.228

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.191
SRR8400027Control-Root22.216

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved