Gene detail information of Glyur002289s00037633.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36720.1 | 1.00E-158 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain |
| NR | XP_004516957.1 | 0 | PREDICTED: uncharacterized protein LOC101497068 isoform X1 [Cicer arietinum] |
| Swissprot | tr|F4KBP5|CHR4_ARATH | 4.00E-06 | Protein CHROMATIN REMODELING 4 {ECO:0000303|PubMed:16547115} |
| trEMBL | tr|K7LHQ9|K7LHQ9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G07170.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02289 | 26942 | 37880 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PHD |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.120 |
| SRR1783600 | control | 9.317 |
| SRR1783602 | moderate drought stress | 14.569 |
| SRR1811619 | moderate drought stress | 14.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.388 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.626 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.051 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.749 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.037 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.136 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 20.113 |
| SRR2868004 | Drought Stress(Tissue:root) | 21.855 |
| SRR2967015 | Control (Tissue:root) | 25.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.702 |
| SRR9715740 | Leave | 10.486 |
| SRR9715741 | Leave | 15.382 |
| SRR9715739 | Root | 3.809 |
| SRR9715742 | Root | 13.841 |
| SRR9715743 | Root | 11.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.135 |
| SRR8749028 | MeJA induced 9h | 28.800 |
| SRR8749029 | MeJA induced 9h | 8.789 |
| SRR8749030 | Uninduced | 18.896 |
| SRR8749031 | Uninduced | 15.272 |
| SRR8749032 | Uninduced | 11.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 20.518 |
| SRR8400027 | Control-Root | 21.104 |