Gene detail

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Gene detail information of Glyur002293s00025510.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G16750.1	6.00E-134	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
NR	XP_003604039.1	0	Receptor-like protein kinase [Medicago truncatula]
COG	YP_007201433.1	4.00E-21	protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|Q5XF57\|Y5576_ARATH	2.00E-79	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	tr\|G7J8I1\|G7J8I1_MEDTR	0	Adenine nucleotide alpha hydrolase-like domain kinase {ECO:0000313\|EMBL:AES74290.1}

Sequence

Transcript Sequence

>Glyur002293s00025510.1
ATGACAGTTGAGAGGAGATGCGTTTTGGTGGGAATCAGAATTGACAGCCATAGCAGACATCTCCTCAACTGGGCCATCGTCAAAGTTGCTGAACCCGGGGATTGTGTTATTGCAGTCCATGTAGTTACAAGTCCAGATTATGTTTCTGAGAGTAAGCCCTTGGTAGATGATTATTTGGAGGTTTATGAAGGGTTATGCGATGCAATAAAGGTAGGTCTCTCGGGTCAGATCATAGCAGGAAGTTCTATTCGAGACATTCTCATCACAGAGGCAAAAAACCGTGCCGCTGTGGCTCTAGTGGTAGGGGGTCGGCCATCCACAGCTAAGTATTGCGCCAAACGACTACCACCAACCACCAATGTTGTTGCCATCCAAGGTGCAAGAATTTTCTTCAGAAGGTGCACCACCGACAAACAACTAACAGGTGGTCTAATAGAGGATCCTAGACCAAGTATTATTAGCAAGGTAATCCACTCTGCATTTGGCGAAGATANCAGAGAATTGGAGGAAAAGGCATTTAAAGGAGGCACGAGCATGAGTGTCTCTTCAAGGTCAAGATCAATATCCCAGTTTGCAGGTGAGCAGAAGCTTGGGTGGCCACTTCTCCGCAGGGCCTCGCACTCGCAGAGCCGTGAAGATGCAAGGGACGTCTCTGTAGTGCAATGGGCAATGAACTTACCNGATCGGTCACCACAACAAAATCCACACCGTTCCACATTTTTTGAGGATGACAGCTATCAAATATTCGAGGCATTCAATTGCAAGTTGTTCCCCCTTGAGCTTCTCAAGTCTTGCACTTGTCAATTCTCTTCAGAAAATATGATTGGGATTGGAGGGAGCAATCGCGTGTACAGAGGAACCCTCCCTGATGGGAAGCCCGTTGCAGTCAAAGTTTTGCAGTCATCAAAAGAAGCCTTGAAAGATTTTGCNCGTGAGGTGGAAATAATATCCTCACTGAAGCACAGAGGCATCACCCCTCTACTTGGGATTTGCATTGAGGACGGCTCTTTAATATCTGTTTATGATTATTTCCCCCAAGGAAGCTTAGAGAAAAATCTACNTGGCAAGAACAAGGATGGATCTTTCTTGTCATGGGAAGTCAGATTCAACGTAGCTGTTGGGATTGCTGAAGCACTCAATTACCTACACAGGGAAACTTCAAAGCCTGTCATACATAGAGATGTCAAATCTTCCAACATTCTTCTTTCCCATGGGTTTGAGCCACAATTATCTGATTTTGGACTTGCCATATGGGGACCAAGAGCTTCGTCATTTCTGACACAAGACGACGTAGTGGGAACATTTGGTTACCTTGCACCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGACGTCTATGCCTTTGGTGTGGTGCTACTTGAACTCATATCAGGGAGGGAACCAATCAGCTCAGAAACTTGCAAAGGACGGGAGAGCTTGGTGGTGTGGGCAAAACCAATATTGGAGAATGGGGATGCTAAAAGCTTATTGGACCAAAATTTGCAAGGGAAGTTTGATGCGGCCCAATTGCAAAAAATGGTTCTGGCAGCATCTCTGTGCATCACCCGGGCTGCGAGGCTTCGTCCTACAATGACTCAGGTACTGAAGATCTTAAAAGGATGTGATGAGAAAGTCGAAAACTTCTTTAACTCTTGCAAGAATGATCATGATCATTCAGAAAATCAAGAAAATATTGATGATGAAGTCTATCCAGATTCAAGTGCAGAGTTGCACCTGAGCCTTGCATTACTTGATGTTGACAATGACACTACATCATATAGNAGTATGGAGAACAGCAATAGTGAACATTTGAAAGAACGATGGAGCAGATCATCCAGTTTCAATTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02293	4861	7775	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.10.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0006950 response to stress

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002293s00025510.1	PF00582.21	Usp	7	112	7.70E-05
Glyur002293s00025510.1	PF00069.20	Pkinase	272	538	1.00E-39

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.393
SRR1783600	control	0.384
SRR1783602	moderate drought stress	0.321
SRR1811619	moderate drought stress	0.344

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.060
DRR006522	Root Winter glycyrrhizin high producing strain	0.058
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.059
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.300
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.294

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	39.621
SRR2868004	Drought Stress(Tissue:root)	36.831
SRR2967015	Control (Tissue:root)	36.328

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.102
SRR9715740	Leave	0.034
SRR9715741	Leave	0.035
SRR9715739	Root	0.557
SRR9715742	Root	0.017
SRR9715743	Root	0.276

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.612
SRR8749028	MeJA induced 9h	36.526
SRR8749029	MeJA induced 9h	15.826
SRR8749030	Uninduced	62.044
SRR8749031	Uninduced	55.160
SRR8749032	Uninduced	36.528

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	7.070
SRR8400027	Control-Root	4.560