Gene detail information of Glyur002307s00039394.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32800.10protein kinase family protein
NRKHN01845.10Receptor like protein kinase S.2 [Glycine soja]
COGYP_003372407.14.00E-19serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|O48837|LRKS2_ARATH0Receptor like protein kinase S.2
trEMBLtr|K7LAJ9|K7LAJ9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G45400.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023072866831280+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002307s00039394.1PF00069.20Pkinase1314313.50E-45
Glyur002307s00039394.1PF07714.12Pkinase_Tyr5568324.60E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.024
SRR1783600control14.052
SRR1783602moderate drought stress4.023
SRR1811619moderate drought stress3.936

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.187
DRR006520Root Summer glycyrrhizin high producing strain5.822
DRR006521Root Winter glycyrrhizin high producing strain0.171
DRR006522Root Winter glycyrrhizin high producing strain0.081
DRR006523Root Summer glycyrrhizin low producing strain9.822
DRR006524Root Summer glycyrrhizin low producing strain9.772
DRR006525Leaf Summer glycyrrhizin high producing strain2.788
DRR006526Leaf Summer glycyrrhizin high producing strain2.642

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.603
SRR2868004Drought Stress(Tissue:root)9.560
SRR2967015Control (Tissue:root)8.190

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.165
SRR9715740Leave4.233
SRR9715741Leave16.319
SRR9715739Root3.582
SRR9715742Root6.703
SRR9715743Root7.118

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.731
SRR8749028MeJA induced 9h9.707
SRR8749029MeJA induced 9h7.071
SRR8749030Uninduced21.623
SRR8749031Uninduced26.508
SRR8749032Uninduced12.493

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.187
SRR8400027Control-Root9.122

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved