Gene detail

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Gene detail information of Glyur002316s00041005.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21230.1	2.00E-90	wall associated kinase 5
NR	XP_006595272.1	0	PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
COG	YP_006422076.1	8.00E-15	serine/threonine protein kinase [Terriglobus roseus DSM 18391]
Swissprot	tr\|Q9LMN7\|WAK5_ARATH	2.00E-107	Wall-associated receptor kinase 5 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur002316s00041005.1
ATGGAAGTGAAGGAGAAGCAACTGTTGATGATGGTTGCATGTTTAGCCCTGCAGTTGGTAGGAGCAGTAGTTGCAGTTGATGATCAAGCAGCCCCTTTTCCAGCACCAGCACTGACACCAGAACAATTAGCCTTGCCTGGCTGCCCTTCCACTTGTGGAGGTGTAGAAATCCCTTACCCATTTGGCATTGGCTATTCATCTACACCAGTTGGTGATAGTCAAACACCCTGTTACTTGAGCGGCAGGTTTAATCTCACTTGCAATGACTCCGAGGTCACTTGGGGTAACTTGCCAGTTTCCAGCATAGACATCCTCCAAGGTCAAATGGAGGTATCATTTTTTATCTCACGGTATTGTAGTAGTGAAAATATTATATCTCGTCCCTGGCTCAACATTGCTTCGTTCAGCATTTCAAGCAAGGAAAACAAGTTTGTGACTATTGGCTGCGACAGTTATGGTTATCTCAATAGCTTTTATGAGGGGGACACATATACAACGGGGTGCTTAACAAGGTGTTACGGCCACAGTAGTAGGGTCGACGATGGACCGTGCTCGGGTATAGGGTGTTGCCAGGTCGATATTCCTCCCAGAATGAGGAATATCACTATAAAAGCTTATGACTTCCCTAATTCGACGGAATCTCTGAGAACCTGCACCTATTCCTTTGTGGTCAAGAAAGACAACTACACTTTTTCATCCAGTGATTTAGAACAAGGTTTTCCTCTCGAAACGACCCCCGTGGTTCTTGACTGGACCGTAGGGAACCAGAACTGTAGTGTAGCTTCCCTGCAGAGTGGAGTCGACGACTATGCGTGCAGGAAAAATAGCCATTGCAATGACACGGACACAGATATTGGTTACCGATGCAGATGCAATCTTGGTTACGAAGGAAACCCTTACCATCCCGACGGCTGCACAGACATTAACGAATGTGAGACAGGACATCATAGATGCATAAGTATTGAAAACTGTAACAACACCATTGGGAGTTACACATGTTTCTGTCCTAAGGGGCAATCTGGAGATGAAACAAAAGAAGGAGGGTGCCACCAACGTGATATACGCACCAAGGTTGTCATCGGAGTTGCAATAGGAGTTGTTGTTCTGTCTATGGGGGCTTCCTTGCTGTTCTTGATATACCAGAAAATGAAACTCATCAAGCTGAAAAAGAAATTCTTTCGGCAGAATGGCGGTTTCATTTTGCTAAATAGACTTTCTACAAGAGAAGACTCCTCTCAAACTGCTAAAATATTCACAGAGGATCAACTAAAGAAGGCCACCAACAACTATGATGAGAGCTTATCATTGGTAGAGGAGGTTTTGGCACCGTTTACAAAGGATTTCTACCAGGCAACAAAATCGTTGCTATCAAGAAAAGATAAGGAGAATAATGCAGCAACATGGAAAATCCGTCTAAAAATAGCAGCAGAGGTAGCTGAAGCTCTGTTATATCTGCATTCATCTGTCTCCATACCCATTATCCATAGAGATGTAAAGAGTGCCAACATTCTCTTGGATGACACTTGCACTGCCAAAGTGTTTGATTTTGGAGCTTCCAGATTGGTTCCACTTGATCAAACTGAGATAGCCACAGTGGAGCAAGGGACTATTGGCTACTTAGACCCAGAGTATATGCTGACAAACCAATTGACTGAGAAAAGTGGTGTATATAGCTTTGGGGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAGCCTTTTCCCTTTGTTAGGCCAGAAGAGAAGAGAAGCCTTCCTATGCACTTCCTATCTTGCTTGAAAAATGATCGCATGTTTGAAGTTATTCAAGATGGCATCTTGGATGAAGAAAATGAGCAAGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTGTGGAGTTGGAGGGAATTATGAGGTCAATGGAGAAGACTTCCTGGATTAATTCAGACATAAATGCAGAGGAGACTCGGTACTTACTTCATGAAACATCATCATCTAGCATTTATGAAACCGGTGATAGCAGCGGACGTGGAAATACTGGGTATGACAGCTTGAAAGATAATGTACAACTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02316	30356	34417	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

cellular_component GO:0016021 integral component of membrane molecular_function GO:0004672 protein kinase activity GO:0004674 protein serine/threonine kinase activity GO:0005509 calcium ion binding GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups GO:0030247 polysaccharide binding "

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002316s00041005.1	PF13947.1	GUB_WAK_bind	46	150	1.60E-19
Glyur002316s00041005.1	PF08488.6	WAK	183	292	7.40E-05
Glyur002316s00041005.1	PF07645.10	EGF_CA	307	342	3.90E-08
Glyur002316s00041005.1	PF00069.20	Pkinase	457	638	5.90E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.087
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.112

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.000
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.009

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.070
SRR9715740	Leave	0.042
SRR9715741	Leave	0.099
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.007

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.019

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.013
SRR8400027	Control-Root	0.001