Gene detail information of Glyur002321s00035191.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G44150.12.00E-124histone-lysine N-methyltransferase ASHH3
NRXP_006587390.10PREDICTED: histone-lysine N-methyltransferase ASHH3-like isoform X1 [Glycine max]
COGYP_003280830.17.00E-24nuclear protein SET [Comamonas testosteroni CNB-2]
Swissprottr|Q945S8|ASHH3_ARATH5.00E-158Histone-lysine N-methyltransferase ASHH3
trEMBLtr|K7LE53|K7LE53_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G28425.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02321366612316-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K11423SETD2, SET2 EC:2.1.1.43 Lysine degradation map00310


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0018024  histone-lysine N-methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002321s00035191.1PF00856.23SET1552611.30E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.066
SRR1783600control1.045
SRR1783602moderate drought stress1.981
SRR1811619moderate drought stress1.913

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.707
DRR006520Root Summer glycyrrhizin high producing strain3.194
DRR006521Root Winter glycyrrhizin high producing strain1.731
DRR006522Root Winter glycyrrhizin high producing strain1.663
DRR006523Root Summer glycyrrhizin low producing strain6.999
DRR006524Root Summer glycyrrhizin low producing strain6.622
DRR006525Leaf Summer glycyrrhizin high producing strain4.352
DRR006526Leaf Summer glycyrrhizin high producing strain4.202

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.345
SRR2868004Drought Stress(Tissue:root)9.038
SRR2967015Control (Tissue:root)10.089

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.271
SRR9715740Leave7.848
SRR9715741Leave9.756
SRR9715739Root0.121
SRR9715742Root1.684
SRR9715743Root1.845

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.579
SRR8749028MeJA induced 9h10.154
SRR8749029MeJA induced 9h13.054
SRR8749030Uninduced9.328
SRR8749031Uninduced11.257
SRR8749032Uninduced6.998

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.870
SRR8400027Control-Root5.579

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved