Gene detail information of Glyur002341s00037857.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19184.1 | 2.00E-15 | AP2/B3-like transcriptional factor family protein |
| NR | XP_003638142.1 | 0 | B3 domain-containing protein [Medicago truncatula] |
| Swissprot | tr|Q0JP99|Y1341_ORYSJ | 3.00E-53 | B3 domain-containing protein Os01g0234100 |
| trEMBL | tr|G8A1E2|G8A1E2_MEDTR | 0 | B3 domain-containing protein {ECO:0000313|EMBL:AES85280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02341 | 4009 | 7465 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | B3 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002341s00037857.1 | PF02362.16 | B3 | 99 | 155 | 9.10E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.417 |
| SRR1783600 | control | 0.426 |
| SRR1783602 | moderate drought stress | 0.140 |
| SRR1811619 | moderate drought stress | 0.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.575 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.708 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.090 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.395 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.405 |
| SRR2967015 | Control (Tissue:root) | 2.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.408 |
| SRR9715740 | Leave | 0.095 |
| SRR9715741 | Leave | 0.108 |
| SRR9715739 | Root | 0.081 |
| SRR9715742 | Root | 0.231 |
| SRR9715743 | Root | 0.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.062 |
| SRR8749028 | MeJA induced 9h | 0.270 |
| SRR8749029 | MeJA induced 9h | 0.338 |
| SRR8749030 | Uninduced | 0.052 |
| SRR8749031 | Uninduced | 0.321 |
| SRR8749032 | Uninduced | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.431 |
| SRR8400027 | Control-Root | 1.570 |