Gene detail information of Glyur002341s00037864.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06720.1 | 3.00E-36 | peroxidase 2 |
| NR | AII99877.1 | 2.71E-73 | peroxidase [Cicer arietinum] |
| Swissprot | tr|Q42578|PER53_ARATH | 5.00E-44 | Peroxidase 53 (Precursor) |
| trEMBL | tr|A0A076L217|A0A076L217_CICAR | 1.00E-73 | Peroxidase {ECO:0000313|EMBL:AII99877.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02341 | 42041 | 42665 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002341s00037864.1 | PF00141.18 | peroxidase | 52 | 140 | 1.20E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.567 |
| SRR1783600 | control | 17.477 |
| SRR1783602 | moderate drought stress | 16.075 |
| SRR1811619 | moderate drought stress | 16.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.660 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.115 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.120 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 89.485 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 88.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 47.460 |
| SRR2868004 | Drought Stress(Tissue:root) | 49.667 |
| SRR2967015 | Control (Tissue:root) | 49.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 20.553 |
| SRR9715740 | Leave | 7.676 |
| SRR9715741 | Leave | 11.510 |
| SRR9715739 | Root | 1.715 |
| SRR9715742 | Root | 7.091 |
| SRR9715743 | Root | 5.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.513 |
| SRR8400027 | Control-Root | 26.018 |