Gene detail information of Glyur002349s00033866.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13560.2 | 5.00E-161 | aminoalcoholphosphotransferase 1 |
| NR | KEH25369.1 | 0 | aminoalcoholphosphotransferase [Medicago truncatula] |
| Swissprot | tr|O82567|AAPT1_ARATH | 0 | Choline/ethanolaminephosphotransferase 1 |
| trEMBL | tr|A0A072U6L5|A0A072U6L5_MEDTR | 0 | Aminoalcoholphosphotransferase {ECO:0000313|EMBL:KEH25369.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02349 | 3299 | 15087 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00993 | EPT1 | EC:2.7.8.1 | Glycerophospholipid metabolism | map00564 |
| Ether lipid metabolism | map00565 | |||
| Phosphonate and phosphinate metabolism | map00440 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002349s00033866.1 | PF01066.16 | CDP-OH_P_transf | 3 | 100 | 5.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.930 |
| SRR1783600 | control | 38.188 |
| SRR1783602 | moderate drought stress | 40.355 |
| SRR1811619 | moderate drought stress | 40.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 58.238 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 57.364 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 60.075 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.073 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.005 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.812 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.150 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 63.341 |
| SRR2868004 | Drought Stress(Tissue:root) | 51.013 |
| SRR2967015 | Control (Tissue:root) | 57.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 26.206 |
| SRR9715740 | Leave | 27.201 |
| SRR9715741 | Leave | 26.761 |
| SRR9715739 | Root | 23.330 |
| SRR9715742 | Root | 30.417 |
| SRR9715743 | Root | 31.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 39.430 |
| SRR8749028 | MeJA induced 9h | 34.098 |
| SRR8749029 | MeJA induced 9h | 29.330 |
| SRR8749030 | Uninduced | 14.903 |
| SRR8749031 | Uninduced | 10.472 |
| SRR8749032 | Uninduced | 11.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 52.426 |
| SRR8400027 | Control-Root | 52.120 |