Gene detail information of Glyur002357s00041555.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G08150.17.00E-120KNOTTED-like from Arabidopsis thaliana
NRNP_001253999.10homeobox protein knotted-1-like 2-like [Glycine max]
Swissprottr|O04135|KNAP2_MALDO2.00E-172Homeobox protein knotted-1-like 2
trEMBLtr|I1M8Y1|I1M8Y1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G10430.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023572129530148-


Gene family

Gene familysubfamily
Transcription Factors FamilyHB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002357s00041555.1PF03790.8KNOX11411848.60E-23
Glyur002357s00041555.1PF03791.8KNOX21942442.40E-25
Glyur002357s00041555.1PF03789.8ELK2853061.10E-09
Glyur002357s00041555.1PF05920.6Homeobox_KN3253645.40E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control136.706
SRR1783600control137.210
SRR1783602moderate drought stress163.631
SRR1811619moderate drought stress161.270

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain202.950
DRR006520Root Summer glycyrrhizin high producing strain200.290
DRR006521Root Winter glycyrrhizin high producing strain16.829
DRR006522Root Winter glycyrrhizin high producing strain16.480
DRR006523Root Summer glycyrrhizin low producing strain307.419
DRR006524Root Summer glycyrrhizin low producing strain306.931
DRR006525Leaf Summer glycyrrhizin high producing strain0.220
DRR006526Leaf Summer glycyrrhizin high producing strain0.252

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.887
SRR2868004Drought Stress(Tissue:root)24.149
SRR2967015Control (Tissue:root)28.154

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.047
SRR9715740Leave0.125
SRR9715741Leave0.000
SRR9715739Root35.429
SRR9715742Root88.591
SRR9715743Root76.877

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.566
SRR8749028MeJA induced 9h10.355
SRR8749029MeJA induced 9h21.201
SRR8749030Uninduced11.194
SRR8749031Uninduced7.506
SRR8749032Uninduced20.226

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root101.287
SRR8400027Control-Root153.457

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved