Gene detail information of Glyur002359s00036944.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30810.20Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
NRXP_004488208.10PREDICTED: probable lysine-specific demethylase JMJ14-like isoform X1 [Cicer arietinum]
Swissprottr|Q8GUI6|JMJ14_ARATH0Probable lysine-specific demethylase JMJ14
trEMBLtr|K7LCJ5|K7LCJ5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G09973.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023591723824187-


Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

cellular_component

GO:0005634  nucleus



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002359s00036944.1PF02375.12JmjN43767.10E-15
Glyur002359s00036944.1PF02373.17JmjC2833995.40E-46
Glyur002359s00036944.1PF02928.11zf-C5HC25065581.00E-14
Glyur002359s00036944.1PF05964.9FYRN7798292.90E-11
Glyur002359s00036944.1PF05965.9FYRC8349203.60E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.441
SRR1783600control1.452
SRR1783602moderate drought stress1.838
SRR1811619moderate drought stress1.780

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.906
DRR006520Root Summer glycyrrhizin high producing strain3.800
DRR006521Root Winter glycyrrhizin high producing strain7.100
DRR006522Root Winter glycyrrhizin high producing strain6.794
DRR006523Root Summer glycyrrhizin low producing strain8.437
DRR006524Root Summer glycyrrhizin low producing strain8.634
DRR006525Leaf Summer glycyrrhizin high producing strain5.512
DRR006526Leaf Summer glycyrrhizin high producing strain5.535

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.828
SRR2868004Drought Stress(Tissue:root)14.736
SRR2967015Control (Tissue:root)12.938

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.814
SRR9715740Leave11.142
SRR9715741Leave14.337
SRR9715739Root0.879
SRR9715742Root5.960
SRR9715743Root6.216

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.603
SRR8749028MeJA induced 9h31.580
SRR8749029MeJA induced 9h20.596
SRR8749030Uninduced20.805
SRR8749031Uninduced42.684
SRR8749032Uninduced21.321

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.008
SRR8400027Control-Root8.506

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved