Gene detail information of Glyur002365s00040106.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13700.10polyamine oxidase 1
NRXP_011047362.10PREDICTED: polyamine oxidase 1-like [Populus euphratica]
COGYP_006874256.13.00E-45amine oxidase [Emticicia oligotrophica DSM 17448]
Swissprottr|Q9FNA2|PAO1_ARATH0Polyamine oxidase 1
trEMBLtr|B9GFC0|B9GFC0_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE84737.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023652275834809+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13366MPAO, PAO1 EC:1.5.3.14 1.5.3.16 1.5.3.- Arginine and proline metabolism map00330
beta-Alanine metabolismmap00410


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002365s00040106.1PF01593.19Amino_oxidase161131.80E-16
Glyur002365s00040106.1PF01593.19Amino_oxidase2084345.10E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.292
SRR1783600control0.300
SRR1783602moderate drought stress1.694
SRR1811619moderate drought stress1.523

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.539
DRR006520Root Summer glycyrrhizin high producing strain6.441
DRR006521Root Winter glycyrrhizin high producing strain5.707
DRR006522Root Winter glycyrrhizin high producing strain5.576
DRR006523Root Summer glycyrrhizin low producing strain2.314
DRR006524Root Summer glycyrrhizin low producing strain2.252
DRR006525Leaf Summer glycyrrhizin high producing strain0.865
DRR006526Leaf Summer glycyrrhizin high producing strain0.961

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.815
SRR2868004Drought Stress(Tissue:root)2.438
SRR2967015Control (Tissue:root)3.528

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.402
SRR9715740Leave0.975
SRR9715741Leave2.216
SRR9715739Root0.440
SRR9715742Root1.260
SRR9715743Root1.202

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.900
SRR8749028MeJA induced 9h16.230
SRR8749029MeJA induced 9h14.920
SRR8749030Uninduced29.267
SRR8749031Uninduced41.753
SRR8749032Uninduced29.356

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.373
SRR8400027Control-Root1.702

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved