Gene detail

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Gene detail information of Glyur002369s00034985.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06820.1	0	STRUBBELIG-receptor family 2
NR	KHN28754.1	0	Protein STRUBBELIG-RECEPTOR FAMILY 2 [Glycine soja]
COG	YP_005517714.1	2.00E-18	serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprot	tr\|Q9FG24\|SRF2_ARATH	0	Protein STRUBBELIG-RECEPTOR FAMILY 2 (Precursor)
trEMBL	tr\|I1L9T8\|I1L9T8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G11840.1}

Sequence

Transcript Sequence

>Glyur002369s00034985.1
ATGGTTTGTAACTACGCTTACGTGAATCTCNTCATCGCTGTCTTCTCGGCAACTTTGATTTCTCAGGGCTTGGCATTTACTGATCCCCCTGACGTCACAGCTCTCCAGGATCTGTACAGGACCTTAAACTACCCACCAGCGCTGCAAGGATGGAACGGTAGTGATCCTTGTGAGGAGTCTTGGACAGATCACAATGCCACTAATAAACGTTATATCTGCTCTCTGTCCTCCTCCAGCAAAATTCAAGGATTGAACCTCACCGGATATCTTGGAGGCTTGCTCAATAATCTACNGCATTTGAAGCAACTCGATGTCAGTTCTAACAACATAGTGGGTGAAATACCAAACGGTTTACCTCCCAATGCCACACATATAAATATGGCTTGCAACTATTTGAGCCATAATATCCCCCATTCATTACCAACCATTAAAAAACTAAGACATCTGAATTTGAGCCACAACTTCTTATATGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCATACAATAATTTCACAGGAGATCTGCCAAGTTCATTTGGTTCCTTGACAAACCTTGATAGATTGTTCCTGCAGAATAATAGNTTCACTGGATCAGTCACCTACCTGGCTGAGCTTCCACTCATTGATTTGAACGTTCAAGAAAATCTGTTTAGTGGCATTCTTCCACAACATTTTCAGTCGATACCAAACTTATGGATTGGTGGGAATATGTTCCATGAGGCNGAAGACTCTCCTCCTTGGGCATTTCCTTTGGACAATGAACCAGTTGAGCATAATACTAGTCGCCCACCAACAACTCAGGCAAATGCCATCGAGAACTTTGTCCCTCATGCAGTAAGGAAACACAAGAAGAAACGTATGGGTCCTGGGGGAATAGCTTTCATGGTTGGTGCAGGAACATTATTGGCAACAGGATTCGCGCTCTTANTCGCGATCCGTTTGAATAAGTTTCACACAGAGAGACTAGAGGAGAGCTTCGAAAGCAATCATAGGTCATTTCGTTCTCCTCCAATCAGTGCAGCCAAAGAGGTCTCTTCCCCGGCAATAGATGAGAGCCTGCAACTCCCACCTTTCAATGCTGCATCCCTTTTGGATCCAAGGCGATTGCCTTCCCAGAACAAAAAAAGAAATGGGGAAACATCAAGAAGAAGTTTTTCCGAGAGAGACAAATTCACTAGAAGGATGAAGGTTTACACAGTAGCAGAGGTTCAGTTGGTTACGAACAGCTTCAGCGAAGAAAACCTTCTGGGAGAGGGATCTCTTGGCCCTGTTTACAGAGCTGAATTTCCAGACAAAAAGGTTTTGGCCGTGAAGAATATCCACATGGCGGGCTTGTCTTTCAGTGAAGAGGAAAAGTTCTTAGATGTTGTCTGTATCGCTTCCCGTCTGAAGCACCCCAACATCGTTGCACTTAAAGGTTACTGTTTGGAGCACGGACAGCATCTTCTTGTGTACGATTATGTCAGAAACTTAACNCTGGACGATGCTCTACACAACGAAGCATACAAGTCTTTATCGTGGGGCATTCGTCTACGAATTGCTCTAGGTGTTGCACAAGCTCTGGACTATTTGCACTCCACGTTCTCCCCTCCCGTCTCCCACGGAAACTTGAAGGCTGCCAATATTCTACTGGACGAAAATCTGATGCCCCGTGTTTCTGACTGTGGCTTGGTTATTTTGAAACCACTGACGAATAATAAAGTCAAAATTCGGGCTTCTGAGATTGCTATTAGAGATACAGGCTACAGTTCACCTGACCATGGCCTACTGGGAATTGGCAGCACAAAGAGTGATGTCTTTGCCTTTGGGGTGTTGCTTCTGGAACTGTTAACTGGAAGAAAACCTTTCAATGGTTTTAAGCCAAGGGAAGAACAATATCTAGCAAATTGGGCTTCATTAAGGCTTCATGACAGCGAGAGTTTGGAAAAAATGGTGGATCCAGCGATTAAAAGGACGTTCTCATCCAAGGCTCTTTCTAGTTATGCTGATATCATCTCCCTCTGCATTCAGCCTGTAAAGGAATTCCGACCTGCAATGTCTGAGATCGTGGACTCACTTGTATCTTTTTCCCAAAAGCTCAACATGTCAAAGAGCGGTGTAGCAGATGGTACTGAACTTGACCCACTTGATANGTCTTTCCGTACAACCACTTCCCGCTTTATACCTTCTTCACCCACATTGAGCTATGTATCCGCCTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02369	18016	22993	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002369s00034985.1	PF00560.28	LRR_1	99	117	0.88
Glyur002369s00034985.1	PF13855.1	LRR_8	162	203	7.20E-07
Glyur002369s00034985.1	PF07714.12	Pkinase_Tyr	422	695	4.60E-33

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.154
SRR1783600	control	0.154
SRR1783602	moderate drought stress	0.234
SRR1811619	moderate drought stress	0.186

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.048
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.188
DRR006522	Root Winter glycyrrhizin high producing strain	0.348
DRR006523	Root Summer glycyrrhizin low producing strain	0.148
DRR006524	Root Summer glycyrrhizin low producing strain	0.099
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.068
SRR2868004	Drought Stress(Tissue:root)	0.025
SRR2967015	Control (Tissue:root)	0.011

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.029
SRR9715740	Leave	0.028
SRR9715741	Leave	0.058
SRR9715739	Root	0.013
SRR9715742	Root	0.035
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.047
SRR8749028	MeJA induced 9h	0.150
SRR8749029	MeJA induced 9h	0.107
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.092
SRR8400027	Control-Root	0.080