Gene detail information of Glyur002378s00036059.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G13180.13.00E-37NAC domain containing protein 83
NRNP_001239882.11.57E-79uncharacterized protein LOC100815663 [Glycine max]
Swissprottr|A0SPJ6|NAMB2_TRITD2.00E-31NAC transcription factor NAM-B2
trEMBLtr|C6THW3|C6THW3_SOYBN6.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G23740.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023782989132003-


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002378s00036059.1PF02365.10NAM151454.40E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.583
SRR1783600control4.549
SRR1783602moderate drought stress5.784
SRR1811619moderate drought stress5.734

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.474
DRR006520Root Summer glycyrrhizin high producing strain16.317
DRR006521Root Winter glycyrrhizin high producing strain0.430
DRR006522Root Winter glycyrrhizin high producing strain0.446
DRR006523Root Summer glycyrrhizin low producing strain9.392
DRR006524Root Summer glycyrrhizin low producing strain8.843
DRR006525Leaf Summer glycyrrhizin high producing strain9.400
DRR006526Leaf Summer glycyrrhizin high producing strain9.230

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.706
SRR2868004Drought Stress(Tissue:root)43.870
SRR2967015Control (Tissue:root)38.986

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave76.011
SRR9715740Leave25.677
SRR9715741Leave87.027
SRR9715739Root14.709
SRR9715742Root60.623
SRR9715743Root45.157

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.962
SRR8749028MeJA induced 9h5.733
SRR8749029MeJA induced 9h6.114
SRR8749030Uninduced42.690
SRR8749031Uninduced9.732
SRR8749032Uninduced6.582

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.599
SRR8400027Control-Root30.980

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved