Gene detail information of Glyur002383s00031061.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18910.1 | 3.00E-161 | Protein kinase superfamily protein |
| NR | XP_004486085.1 | 0 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2-like [Cicer arietinum] |
| COG | YP_005269820.1 | 3.00E-21 | serine/threonine-protein kinase PrkC [Acetobacterium woodii DSM 1030] |
| Swissprot | tr|Q8RXC8|RBK2_ARATH | 1.00E-143 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 |
| trEMBL | tr|K7M0Z0|K7M0Z0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28370.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02383 | 28592 | 32381 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.10.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002383s00031061.1 | PF00069.20 | Pkinase | 180 | 382 | 7.80E-39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.021 |
| SRR1783600 | control | 0.021 |
| SRR1783602 | moderate drought stress | 0.032 |
| SRR1811619 | moderate drought stress | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.019 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.048 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.495 |
| SRR9715740 | Leave | 3.367 |
| SRR9715741 | Leave | 4.737 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.048 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.015 |
| SRR8400027 | Control-Root | 0.010 |