Gene detail

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Gene detail information of Glyur002389s00038673.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51550.1	3.00E-115	Malectin/receptor-like protein kinase family protein
NR	XP_003520130.2	0	PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max]
COG	YP_007058447.1	7.00E-06	serine/threonine protein kinase [Rivularia sp. PCC 7116]
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	4.00E-131	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|K7K7W7\|K7K7W7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA02G13460.2}

Sequence

Transcript Sequence

>Glyur002389s00038673.1
ATGAAGGAAACTCACATAATAGAGTCATATAGGTTTGTCATTAGCTTTGTACCACACCTCCTATTCTTCTTCTTCTTCTTCTTCCATTTAACCACTTGTGATTCAATAAACGCCCCTTCAGATAAAATCCTCCTCAACTGTGGTTCTTCTGGAGCATCACAATTCAATGGTGTCAATTGGATGGGAGATATTGGAACTAGTTTCTTGCCTCCAGCATATGACAAAAGCTCATCTACACTCTTTGTCTCAAACAAAGACTCTGCAGCACCAAAAGTCCCATACTCAACAGCAAGAATAATTCATTCTCCATTCACCTACTCATTCCCCTTCTCACCTGGCCTTAAATTCATTCGGCTTTACTTCCTCTCAACATCATATTTGATGATGAACCCCTCCAACTCCAGGGCTTATTTTTCTGTCAAAGCTGGACCTTACACTTTGGTCAGTAATTTCAATCCATCTATTACTGCAGAAGAGCTCAATTTGGGGTATTTCACCAAGGATTTCTTTGTCGACGTCAGGGAAGAGAAACTCAACATTACTTTTAGTCCATCTTCTCTAGTTTCCAATTCATTTGCTTCTGTAAATGGCATTGAGATATTCTCAGTTCCCCCCACTATATACTTTCGAGGTTCAAAGGTTCCTTACCTTGGACACCAAGAACCATTATTTATTAGTGAAGAATATGCTCTTGAGATGCTTTTCCGGGTAAACATTGATGGATATGACAATCCTGTTGTTGAGAATGCTTTTGGGACATGGTTGGATGATTTCAGCTACATATCTGATTTCCAATATGGAAGCGTCCTTAATATAAAGAACCTTCAAGTCAGGATGAATTACACTACTCTCACCTCAAATGATTACAATTATTCAGCACCAGAGGAATTATATTGGACTGCCAGGACAATGGGTAGCCATGGAGATGCCAACATGAGGTACAATTTAACATGGTCATTCCCTGTTGAATCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGCGAGATCTCCATGGCGGTAACGCAGGTCAATCAGAGGGTGTTTGCGGTGTACATAAACAACCAAACAGCAGAGGAAAAGATGGACTTGGTTGCTTTGGCTGGTGCACCATTTACTCCTTTACACAGAGACTATGTTGTTATGGTTCCTATGGAGAGTACCGAGAGAAGGAAAGATTTGTGGATATCACTTCACCCCAACTTGGAGTCAAAACCAAAATATGCTGATGCCATATTGAATGGAGTTGAGATTATCAAGTTAAGTGATAGCAATTACAATCTTGCTGCAAGGTTCCAGCTGAGAAAGGAACAAAAGGAGAAGAAAGTAGTTCCACGTGTCCTAGTTGTGGCTGGTACTTTAGGTGCCATTTTGGTTTTGGGACTGTTCATTGCAATTTCCATTTTTATCCGCAGAGCATGGACAAAAATAAAGAGAAGAACTTTTCAGGTACTCCCATTTAATTGTACTGCAAGAAGTCACAAAAACATTCAAGTAACAGTGACCGTAGGTCCTTGCAATCAATTCACTTTAGCGGAAATCAGCATAGCCACCAACAACTTCAGTGAAGCTCTTGTCATTGGTGAGGGAGGCTTTGGAAAAGTGTACAAAGGCATCATGCCTGATGGGGTGACTCATGTGGCAATAAAGCGGTCTAAGCCTAGTTCACGTCAAGGACTTAAGGAGTTTCAAAATGAGGTCAATTTTCTCTCATTTCGTCACATGAATCTAGTCTCATTGCTGGGCTACTGCCAAGAGAGCAATGAACTGATACTTGTCTATGAATACATGGCTCAGGGCCCTCTTTACCCTGAGTACTGTAAGCGAAGAAAACTGACTGAAAAATCTGATGTCTATTCATTTGGAGTGGTTCTGTTTGAAGTCTTGTGTGGAAGACCAGCTGTGAATCCTGTGGCAGTGGAAGAGGAAAGTGAGAAAGTTGGTTTGGCTGAGTGGGCTATGCATTGTTACCAATCTGGAACCATTGATCGATTGGTTGACCCGCATTTACAAGGAAAAATAAGGATGGAATGCGTGATGGCACTTGTGGAGAATGGCATCAAGTGCTTGACTAACAAGAGTGCAGAAAGGCCAACTATGGGAGAGGTGCTTAGTAATTTGGAGAAGATTCTTTCCTTGCAGGAGAGTTTAGAGGAACAAGAAATTAATGCAATTCACACATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02389	6430	8874	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.3.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002389s00038673.1	PF12819.2	Malectin_like	45	420	1.10E-44
Glyur002389s00038673.1	PF07714.12	Pkinase_Tyr	526	602	3.70E-13
Glyur002389s00038673.1	PF07714.12	Pkinase_Tyr	604	707	6.90E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.048
SRR1783600	control	0.050
SRR1783602	moderate drought stress	0.879
SRR1811619	moderate drought stress	0.891

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.554
DRR006520	Root Summer glycyrrhizin high producing strain	0.551
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.147
DRR006524	Root Summer glycyrrhizin low producing strain	0.151
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.192
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.195

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.076
SRR2868004	Drought Stress(Tissue:root)	0.263
SRR2967015	Control (Tissue:root)	0.157

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	67.309
SRR9715740	Leave	66.937
SRR9715741	Leave	77.604
SRR9715739	Root	2.164
SRR9715742	Root	18.157
SRR9715743	Root	13.780

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.131
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.052

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.106
SRR8400027	Control-Root	0.528