Gene detail information of Glyur002391s00040856.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G78290.31.00E-136Protein kinase superfamily protein
NRXP_004490378.10PREDICTED: serine/threonine-protein kinase SAPK2-like isoform X1 [Cicer arietinum]
COGYP_002560205.11.00E-30hypothetical protein MCCL_0802 [Macrococcus caseolyticus JCSC5402]
Swissprottr|A2YNT8|SAPK2_ORYSI0Serine/threonine-protein kinase SAPK2
trEMBLtr|G7KAG1|G7KAG1_MEDTR0Serine/Threonine-kinase SAPK1-like protein {ECO:0000313|EMBL:AES98115.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023913510738716-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14498SNRK2 EC:2.7.11.1 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002391s00040856.1PF00069.20Pkinase42501.80E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.399
SRR1783600control12.137
SRR1783602moderate drought stress17.006
SRR1811619moderate drought stress17.037

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.470
DRR006520Root Summer glycyrrhizin high producing strain24.305
DRR006521Root Winter glycyrrhizin high producing strain112.260
DRR006522Root Winter glycyrrhizin high producing strain108.281
DRR006523Root Summer glycyrrhizin low producing strain44.875
DRR006524Root Summer glycyrrhizin low producing strain45.420
DRR006525Leaf Summer glycyrrhizin high producing strain5.510
DRR006526Leaf Summer glycyrrhizin high producing strain5.453

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.947
SRR2868004Drought Stress(Tissue:root)16.495
SRR2967015Control (Tissue:root)18.585

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.550
SRR9715740Leave13.660
SRR9715741Leave15.308
SRR9715739Root9.135
SRR9715742Root28.874
SRR9715743Root26.933

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h45.467
SRR8749028MeJA induced 9h30.699
SRR8749029MeJA induced 9h37.311
SRR8749030Uninduced6.508
SRR8749031Uninduced8.836
SRR8749032Uninduced10.697

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.625
SRR8400027Control-Root19.375

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved