Gene detail information of Glyur002398s00034257.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16570.10UDP-Glycosyltransferase superfamily protein
NRXP_004488821.10PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase-like isoform X2 [Cicer arietinum]
trEMBLtr|G7IH35|G7IH35_MEDTR0Group 1 family glycosyltransferase {ECO:0000313|EMBL:AES66439.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold023981587125347+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT33


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03842ALG1 EC:2.4.1.142 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002398s00034257.1PF13579.1Glyco_trans_4_4381997.20E-08
Glyur002398s00034257.1PF13692.1Glyco_trans_1_42724391.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.423
SRR1783600control3.483
SRR1783602moderate drought stress5.026
SRR1811619moderate drought stress4.996

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.995
DRR006520Root Summer glycyrrhizin high producing strain11.703
DRR006521Root Winter glycyrrhizin high producing strain3.287
DRR006522Root Winter glycyrrhizin high producing strain3.284
DRR006523Root Summer glycyrrhizin low producing strain6.452
DRR006524Root Summer glycyrrhizin low producing strain6.243
DRR006525Leaf Summer glycyrrhizin high producing strain2.172
DRR006526Leaf Summer glycyrrhizin high producing strain2.125

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.599
SRR2868004Drought Stress(Tissue:root)24.963
SRR2967015Control (Tissue:root)20.262

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.093
SRR9715740Leave3.533
SRR9715741Leave4.919
SRR9715739Root11.517
SRR9715742Root15.510
SRR9715743Root14.127

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.170
SRR8749028MeJA induced 9h13.586
SRR8749029MeJA induced 9h4.568
SRR8749030Uninduced8.733
SRR8749031Uninduced5.604
SRR8749032Uninduced4.981

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.209
SRR8400027Control-Root11.631

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved