Gene detail information of Glyur002408s00032641.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66920.22.00E-89Protein kinase superfamily protein
NRAES89380.20receptor-like kinase [Medicago truncatula]
COGYP_001958461.16.00E-22hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q3ECH2|Y1670_ARATH3.00E-98Probable receptor-like protein kinase At1g67000 (Precursor)
trEMBLtr|G7JMD7|G7JMD7_MEDTR0Receptor-like kinase {ECO:0000313|EMBL:AES89380.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold024083112734193+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002408s00032641.1PF07714.12Pkinase_Tyr3275983.00E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.368
SRR1783600control5.024
SRR1783602moderate drought stress5.517
SRR1811619moderate drought stress5.530

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.753
DRR006520Root Summer glycyrrhizin high producing strain2.820
DRR006521Root Winter glycyrrhizin high producing strain0.882
DRR006522Root Winter glycyrrhizin high producing strain1.041
DRR006523Root Summer glycyrrhizin low producing strain0.228
DRR006524Root Summer glycyrrhizin low producing strain0.104
DRR006525Leaf Summer glycyrrhizin high producing strain4.884
DRR006526Leaf Summer glycyrrhizin high producing strain4.669

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.939
SRR2868004Drought Stress(Tissue:root)0.909
SRR2967015Control (Tissue:root)0.981

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.545
SRR9715740Leave3.232
SRR9715741Leave18.497
SRR9715739Root0.359
SRR9715742Root6.042
SRR9715743Root3.561

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.549
SRR8749028MeJA induced 9h0.347
SRR8749029MeJA induced 9h0.325
SRR8749030Uninduced0.743
SRR8749031Uninduced0.317
SRR8749032Uninduced0.214

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.288
SRR8400027Control-Root4.854

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved