Gene detail information of Glyur002418s00033277.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G79460.10Terpenoid cyclases/Protein prenyltransferases superfamily protein
NRXP_004488548.10PREDICTED: ent-kaur-16-ene synthase, chloroplastic-like [Cicer arietinum]
COGNP_217894.14.00E-15Halimadienyl diphosphate synthase [Mycobacterium tuberculosis H37Rv]
Swissprottr|Q39548|KSB_CUCMA0Ent-kaur-16-ene synthase, chloroplastic (Precursor)
trEMBLtr|A0A072VJA0|A0A072VJA0_MEDTR0Ent-kaurene synthase {ECO:0000313|EMBL:KEH38225.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold024182335827971+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04121E4.2.3.19 EC:4.2.3.19 Diterpenoid biosynthesis map00904


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0000287  magnesium ion binding

GO:0010333  terpene synthase activity

GO:0016829  lyase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002418s00033277.1PF01397.16Terpene_synth2183962.60E-41
Glyur002418s00033277.1PF03936.11Terpene_synth_C4606511.00E-53


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.813
SRR1783600control1.846
SRR1783602moderate drought stress1.468
SRR1811619moderate drought stress1.552

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.449
DRR006520Root Summer glycyrrhizin high producing strain2.576
DRR006521Root Winter glycyrrhizin high producing strain0.304
DRR006522Root Winter glycyrrhizin high producing strain0.213
DRR006523Root Summer glycyrrhizin low producing strain1.673
DRR006524Root Summer glycyrrhizin low producing strain1.706
DRR006525Leaf Summer glycyrrhizin high producing strain0.214
DRR006526Leaf Summer glycyrrhizin high producing strain0.286

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.577
SRR2868004Drought Stress(Tissue:root)5.138
SRR2967015Control (Tissue:root)4.212

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.173
SRR9715740Leave0.054
SRR9715741Leave0.170
SRR9715739Root0.488
SRR9715742Root1.132
SRR9715743Root0.895

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.619
SRR8749028MeJA induced 9h5.198
SRR8749029MeJA induced 9h2.678
SRR8749030Uninduced2.208
SRR8749031Uninduced0.244
SRR8749032Uninduced0.613

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.996
SRR8400027Control-Root8.922

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved