Gene detail information of Glyur002432s00044132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08250.1 | 1.00E-121 | GRAS family transcription factor |
| NR | CAH55769.1 | 0 | GRAS family protein [Pisum sativum] |
| Swissprot | tr|Q5NE24|NSP2_MEDTR | 0 | Nodulation-signaling pathway 2 protein |
| trEMBL | tr|Q5NE23|Q5NE23_PEA | 0 | GRAS family protein {ECO:0000313|EMBL:CAH55769.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02432 | 24990 | 26513 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002432s00044132.1 | PF03514.9 | GRAS | 112 | 497 | 4.70E-98 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.192 |
| SRR1783600 | control | 0.208 |
| SRR1783602 | moderate drought stress | 0.175 |
| SRR1811619 | moderate drought stress | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.493 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.610 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.333 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.969 |
| SRR2967015 | Control (Tissue:root) | 10.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.000 |
| SRR9715740 | Leave | 1.846 |
| SRR9715741 | Leave | 4.700 |
| SRR9715739 | Root | 3.958 |
| SRR9715742 | Root | 2.878 |
| SRR9715743 | Root | 4.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.543 |
| SRR8749028 | MeJA induced 9h | 1.381 |
| SRR8749029 | MeJA induced 9h | 1.578 |
| SRR8749030 | Uninduced | 1.795 |
| SRR8749031 | Uninduced | 1.088 |
| SRR8749032 | Uninduced | 2.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.231 |
| SRR8400027 | Control-Root | 2.116 |