Gene detail information of Glyur002448s00031641.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G16710.10histone acetyltransferase of the CBP family 12
NRXP_004488916.10PREDICTED: LOW QUALITY PROTEIN: histone acetyltransferase HAC1-like [Cicer arietinum]
Swissprottr|Q9FWQ5|HAC12_ARATH0Histone acetyltransferase HAC12
trEMBLtr|I1KG14|I1KG14_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G00230.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold024481082426853+


Gene family

Gene familysubfamily
Transcription Factors FamilyPHD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04498EP300, CREBBP, KAT3 EC:2.3.1.48 Wnt signaling pathway map04310
Notch signaling pathwaymap04330
TGF-beta signaling pathwaymap04350
Jak-STAT signaling pathwaymap04630
HIF-1 signaling pathwaymap04066
FoxO signaling pathwaymap04068
cAMP signaling pathwaymap04024
Cell cyclemap04110
Adherens junctionmap04520
Glucagon signaling pathwaymap04922
Thyroid hormone signaling pathwaymap04919
Melanogenesismap04916
Long-term potentiationmap04720
Pathways in cancermap05200
MicroRNAs in cancermap05206
Viral carcinogenesismap05203
Renal cell carcinomamap05211
Prostate cancermap05215
Huntington's diseasemap05016
Tuberculosismap05152
HTLV-I infectionmap05166
Influenza Amap05164
Hepatitis Bmap05161
Herpes simplex infectionmap05168
Epstein-Barr virus infectionmap05169


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003712  transcription cofactor activity

GO:0004402  histone acetyltransferase activity

GO:0005515  protein binding

GO:0008270  zinc ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002448s00031641.3PF02135.11zf-TAZ6657364.20E-16
Glyur002448s00031641.3PF00628.24PHD105210939.30E-07
Glyur002448s00031641.3PF08214.6KAT11114813127.00E-53
Glyur002448s00031641.3PF08214.6KAT11131514093.90E-10
Glyur002448s00031641.3PF00569.12ZZ152215634.10E-09
Glyur002448s00031641.3PF02135.11zf-TAZ157016421.80E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control28.869
SRR1783600control29.212
SRR1783602moderate drought stress39.083
SRR1811619moderate drought stress38.853

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.451
DRR006520Root Summer glycyrrhizin high producing strain25.298
DRR006521Root Winter glycyrrhizin high producing strain26.887
DRR006522Root Winter glycyrrhizin high producing strain26.100
DRR006523Root Summer glycyrrhizin low producing strain29.196
DRR006524Root Summer glycyrrhizin low producing strain29.272
DRR006525Leaf Summer glycyrrhizin high producing strain19.089
DRR006526Leaf Summer glycyrrhizin high producing strain18.864

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.645
SRR2868004Drought Stress(Tissue:root)45.720
SRR2967015Control (Tissue:root)44.639

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave27.534
SRR9715740Leave27.807
SRR9715741Leave29.666
SRR9715739Root3.376
SRR9715742Root31.675
SRR9715743Root28.092

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.007
SRR8749028MeJA induced 9h64.533
SRR8749029MeJA induced 9h31.492
SRR8749030Uninduced44.123
SRR8749031Uninduced65.385
SRR8749032Uninduced37.133

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.409
SRR8400027Control-Root39.054

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved