Gene detail information of Glyur002456s00039882.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72030.1 | 2.00E-52 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | KHM98824.1 | 6.02E-149 | hypothetical protein glysoja_022234 [Glycine soja] |
| COG | YP_007107975.1 | 6.00E-13 | N-acetyltransferase GCN5 [Geitlerinema sp. PCC 7407] |
| trEMBL | tr|I1KWA3|I1KWA3_SOYBN | 2.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G26160.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02456 | 34568 | 36955 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002456s00039882.1 | PF00583.19 | Acetyltransf_1 | 154 | 239 | 4.50E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.114 |
| SRR1811619 | moderate drought stress | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.088 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.129 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.859 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 26.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.858 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.367 |
| SRR2967015 | Control (Tissue:root) | 0.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 118.725 |
| SRR9715740 | Leave | 131.016 |
| SRR9715741 | Leave | 111.262 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.177 |
| SRR9715743 | Root | 0.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.210 |
| SRR8749028 | MeJA induced 9h | 0.754 |
| SRR8749029 | MeJA induced 9h | 0.570 |
| SRR8749030 | Uninduced | 1.052 |
| SRR8749031 | Uninduced | 0.857 |
| SRR8749032 | Uninduced | 1.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.705 |
| SRR8400027 | Control-Root | 0.358 |