Gene detail information of Glyur002496s00045103.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41750.2 | 6.00E-37 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | XP_003604542.1 | 2.22E-109 | Resistance protein [Medicago truncatula] |
| Swissprot | tr|Q9SZ67|WRK19_ARATH | 2.00E-41 | Probable WRKY transcription factor 19 |
| trEMBL | tr|G7JKN3|G7JKN3_MEDTR | 8.00E-110 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES86739.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02496 | 5918 | 8700 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002496s00045103.1 | PF00560.28 | LRR_1 | 224 | 243 | 0.92 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.171 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.832 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.398 |
| SRR2967015 | Control (Tissue:root) | 1.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.164 |
| SRR8749028 | MeJA induced 9h | 2.026 |
| SRR8749029 | MeJA induced 9h | 1.641 |
| SRR8749030 | Uninduced | 1.113 |
| SRR8749031 | Uninduced | 6.865 |
| SRR8749032 | Uninduced | 0.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.130 |
| SRR8400027 | Control-Root | 0.012 |