Gene detail information of Glyur002500s00036001.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10550.12.00E-105xyloglucan:xyloglucosyl transferase 33
NRKHN10598.10Putative xyloglucan endotransglucosylase/hydrolase protein 33 [Glycine soja]
Swissprottr|Q8LC45|XTH33_ARATH1.00E-131Probable xyloglucan endotransglucosylase/hydrolase protein 33 (Precursor)
trEMBLtr|K7MRZ1|K7MRZ1_SOYBN1.00E-177Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025002134523151-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH16


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006073  cellular glucan metabolic process


cellular_component

GO:0005618  cell wall

GO:0048046  apoplast


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds

GO:0016762  xyloglucan:xyloglucosyl transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002500s00036001.1PF00722.16Glyco_hydro_16712336.50E-37
Glyur002500s00036001.1PF06955.7XET_C2723152.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control43.750
SRR1783600control44.346
SRR1783602moderate drought stress54.777
SRR1811619moderate drought stress54.897

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.902
DRR006520Root Summer glycyrrhizin high producing strain22.641
DRR006521Root Winter glycyrrhizin high producing strain0.314
DRR006522Root Winter glycyrrhizin high producing strain0.307
DRR006523Root Summer glycyrrhizin low producing strain88.914
DRR006524Root Summer glycyrrhizin low producing strain87.209
DRR006525Leaf Summer glycyrrhizin high producing strain44.978
DRR006526Leaf Summer glycyrrhizin high producing strain43.778

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.012
SRR2868004Drought Stress(Tissue:root)12.979
SRR2967015Control (Tissue:root)15.250

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.592
SRR9715740Leave37.518
SRR9715741Leave53.474
SRR9715739Root1.620
SRR9715742Root5.923
SRR9715743Root4.069

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.286
SRR8749028MeJA induced 9h27.543
SRR8749029MeJA induced 9h2.379
SRR8749030Uninduced29.442
SRR8749031Uninduced1.154
SRR8749032Uninduced0.947

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.634
SRR8400027Control-Root28.979

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved