Gene detail

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Gene detail information of Glyur002500s00036003.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G59110.1	1.00E-53	Protein kinase superfamily protein
NR	KHN45445.1	0	Putative receptor-like protein kinase [Glycine soja]
COG	YP_005583842.1	2.00E-22	putative serine/threonine protein kinase [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]
Swissprot	tr\|Q8H186\|Y3545_ARATH	3.00E-58	Probable receptor-like protein kinase At3g55450
trEMBL	tr\|K7MRZ3\|K7MRZ3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G18941.2}

Sequence

Transcript Sequence

>Glyur002500s00036003.1
ATGTTAGATTTCTCTTGTTCTATTGTAACAAAGTTTCTAGCTAAGAGCTCCTTGCTATTACTTCTGCTGTTTAGCACCCTTCATCTTGTGTGTTCTCAAACTTCTGTTCATGNTTGTATCCTTGATGTTCAATTTTCCTCAGCCTTGAATAGTTCAAATTGTGAATTGCACAATTGGGGAGGGTTTACCAATAGCAGCTGTTGTGGATTAGATTTTGGTGATTACCTATATGCATTGGGGCTGAAGGCCAACCACACTGGAAAAATTTTCTTGAATTCCTCAGAGCAAAGAACTTGCTTAGCATCGATGGAAGCTTCCGAGAAAAACTTTACAGGCTGTGGGATAGAGAAGCTTACAAGTGGAGCTGGTGGTTGCTCTGATTACACTCTTGCAGATGTTATCAAGAAGTTTGGAGACAAATTGAAGAGATTGGAAGAAGATTGCATGCNTTTAAGCATAAATGGTAGGTCAAGTGAAACTTGCAATACATGTTTGAAAGCATGGGAGAACATCAATGCAAAATCAGACAGTATAACGGGGTCAGAGTCAGAAAAAATCAGTGCTTATCTTTGTAGATTTGCTGTGCTTGTCTCACTAACAAGCACAAGAATTTATGATAGGGAGTCAATTCATGCAGTTTATAAATGCCTTGATCAGCTAGAAGTCAAGGCTAGAGACAATGCTAATATCAACCAAGGTCTCTGGATTCTAGCCTTTGGCTTAACAGGAATTACNGCACTAGTGCTTCTTGCCGCCCTAGCATTTTTTATCAGAAGAACTAGAAGTGAACCAACCGTACAAGATGAGACTGAGGATTCAACATCATTTAAGATAACCTTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCTTCAAATTTCATTGGTCAAGGCATAGCCGGAAAAGTGTACAAAGGTATACTCTCCAATGGTCAGTATGTTGCAGTAAAACATATCATAAAAGAAGGTTACATGGAGACTTTTGTTAGAGAAGTGAGAAGCCTTTCCCATGTTAGACATCCCAACCTAGTAGCTTTGCTTGGATACTGTGAAAATGAAGCTGAATGCTTCTTANTATATGAACTATGCCACAATGGAAACCTCTCAGAGTGGCTATTTGACAATGATAAAGTTCTTTCATGGATTCAAAGATTAGAGATTGCTGTAGATAGTGCNCGAGGTCTTGAGTTTCTCCACACCTACCCAGGTGGCTGCATTGTTCACCGTGACATAAAGCCATCAAACATTCTTATTGATGCCAACTTCCAAGCAAANCTTTCAGACTTTGGGTTGTCCAGGGTCATGGACCCGGGTCAATCCTATGTGAGCTCTGAAGTAAGAGGAACATTTGGATATATTGATCCAGAATACCGAAGAAATCACCATGTAAATGCTTCAGGAGATGTCTACAGCTTTGGAATTGTGTTGTTGCAACTTCTATCAGGACAAAGGGTCCTTAACATCGATTTCCAAAGACCCATGTCCCTAAGTAAAATGGCCTGTGATTTTGCTAGATATGGTGATATTTCAGAATTTGCTGATTCGAAGCTCAAGGGNGAGTACTCTGCAGAAGCATTTGAGATCATACTAAAACTAGCATTGTCTTGCATAGGGCTGAAGCAGCNAAGACCCTCTATAGAGCAAGTGCTATATAGCCTAGTAAAGGCACTGGATATTTCATTGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02500	27644	30937	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002500s00036003.1	PF00069.20	Pkinase	295	490	3.90E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.157
SRR1783600	control	0.126
SRR1783602	moderate drought stress	0.238
SRR1811619	moderate drought stress	0.290

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.562
DRR006522	Root Winter glycyrrhizin high producing strain	0.575
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.054
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.054

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	2.990
SRR2868004	Drought Stress(Tissue:root)	2.288
SRR2967015	Control (Tissue:root)	1.139

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.039
SRR9715739	Root	0.000
SRR9715742	Root	0.182
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.350
SRR8749028	MeJA induced 9h	0.808
SRR8749029	MeJA induced 9h	0.539
SRR8749030	Uninduced	1.346
SRR8749031	Uninduced	0.974
SRR8749032	Uninduced	1.967

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.312
SRR8400027	Control-Root	0.278