Gene detail information of Glyur002511s00035431.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26210.1 | 4.00E-53 | cytochrome P450, family 71, subfamily B, polypeptide 23 |
| NR | XP_003636955.1 | 5.99E-102 | Cytochrome P450 [Medicago truncatula] |
| COG | YP_005093437.1 | 2.00E-23 | cytochrome P450 family protein [Oceanimonas sp. GK1] |
| Swissprot | tr|O48923|C71DA_SOYBN | 2.00E-80 | Cytochrome P450 71D10 |
| trEMBL | tr|G7ZY05|G7ZY05_MEDTR | 2.00E-102 | Cytochrome P450 {ECO:0000313|EMBL:AES84093.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02511 | 1339 | 3535 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B23 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002511s00035431.1 | PF00067.17 | p450 | 1 | 81 | 1.90E-18 |
| Glyur002511s00035431.1 | PF00067.17 | p450 | 83 | 267 | 1.90E-59 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.111 |
| SRR1783600 | control | 0.184 |
| SRR1783602 | moderate drought stress | 0.184 |
| SRR1811619 | moderate drought stress | 0.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.341 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.485 |
| SRR2967015 | Control (Tissue:root) | 2.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.286 |
| SRR9715740 | Leave | 0.194 |
| SRR9715741 | Leave | 0.435 |
| SRR9715739 | Root | 0.182 |
| SRR9715742 | Root | 0.333 |
| SRR9715743 | Root | 0.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.064 |
| SRR8749028 | MeJA induced 9h | 0.404 |
| SRR8749029 | MeJA induced 9h | 0.112 |
| SRR8749030 | Uninduced | 0.114 |
| SRR8749031 | Uninduced | 0.284 |
| SRR8749032 | Uninduced | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.451 |
| SRR8400027 | Control-Root | 1.052 |