Gene detail

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Gene detail information of Glyur002511s00035432.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G25120.1	6.00E-110	ytochrome p450, family 71, subfamily B, polypeptide 11
NR	XP_004491658.1	0	PREDICTED: uncharacterized protein LOC101503808 [Cicer arietinum]
COG	YP_004676310.1	2.00E-31	cytochrome P450 family protein [Hyphomicrobium sp. MC1]
Swissprot	tr\|O48923\|C71DA_SOYBN	0	Cytochrome P450 71D10
trEMBL	tr\|G7IUX9\|G7IUX9_MEDTR	0	Cytochrome P450 family 71 protein {ECO:0000313\|EMBL:AES70567.2}

Sequence

Transcript Sequence

>Glyur002511s00035432.1
ATGGGGCTGTTGGAGCTTCATGTTCTGATATCTGCAATCCTTGGTTTCCTCTTGTTCATCATGGTAATCAAAATTGTTTGGAGTTCAAAAACTAAGAGTACAAACTCCAAATTGCCACCAGGACCAAGAAAACTTCCTCTTATAGGAAACATGCACCAACTAATTGGAGCCCTGCCCCATCGCTCCCTAGCAAAATTGGCTCAGCAATATGGGCCACTAATGCACATGAAGCTTGGTGAGCTTTCTTGCATAGTGGTGTCATCTCCGGAAATGGCTAAAGAGGTTATGAAAACACATGATCTCAACTTTGCAAACAGGCCTCCTGTTATTTCTGGTGAAATAATAGGTTATGGCTTTAAAGCGATGACTTTTTCTCCATATGGAACCTATTGGAGGCAAATGAGAAAGATTTGTACTGTGGAGCTACTAACACCAAAGCGTGTTGAGTCCTTCAGATCAATCAGGGAAGAAGAATTGGCAAATTTTGTCAAAGATATAATCTTGAGTGAAGGGTCACCAATCAATCTCAGTGAGAAGATTGATTCATTGTCATATGGATTAACATCAAGGACAGCCTTTGGTGCACAACCCAAAGGGAAAGAAGAGTATAGGAAACTCATGAAGGAAACGTTAAAGTTGGGTGGAGGGTTCTCTGTTTCTGATATGTACCCTTCCATTAAGGTTCTACAAGTTCTTACAGGATTAAGGCCAAAGCTTGAGAAGATCCATCGTGGAATGGACAAGATACTGGAGAACATTGTAAGAAGTCATATGGAAAAGAATTTGGAGGCAAAGGACAATGAAGAAATAGGGGCAGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGCATAGTGATCAGGAACATCCCGTATCAAACATTGATGTCAAAGCAACAATTTTGGATATCTTCAGTGCTGGAAGCGACACCACATTTACAACTCTAGAGCGGGCAATGTTAGAATTGATCAGAAACCCACATGTGATGGAGAAAGCCCAAACTGAGGTGAGAATGGTCTATAAGGAAAAAGGGTATGTGGATGAACAAAGTCTTCATGAGCTGAAATATTTGAGGTCAGTTATCAAAGAAACATTGCGTCTACATCCACCTGTTCCATTCTTACTTCCAAGAGAATGCAGTGAGAGATGTGAAATCATTGGGTATGAGATACCTGCCAAGAGCAGGGTCATTGTTAATGCATGGTCAATATGCAGAGATCCCAACTATTGGATTGAAGCTGAGAAATTTTATCNAGAAAGGTTCCTTGANAGCTCAGTTGATTACAAAGGTGTAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATNGCATTTGGTATTGCTANCACATCAATCTCACTTGCAAACTTGCTTTTCCATTTTGATTGGAAGATGGCTGGTGGAAATAAGCCTGGAGAACTTGACATAACTGAATCCTTTGGCTTGACTGTAAGAAGAAAACATGATCTGTGGTTGGTTCCAATCACTTATCACTCAGAAGCAAGCATGGGGTTGGACCTTCATGTTCTGATATCTGCAATCCTTGGTTTCCTCTTGTTCATCATGGTAATCAAAATTGTTTGGAGTTCAAAAACTAAGAGTACAACCTCCAAATTGCCACCAGGACCAAGAAAACTTCCTCTTATAGGAAACATGCACCATGTTGGAGCTCTGCCCCATCGCTCCCTAGCAAAATTGGCTCAGCAATATGGGCCTCTAATGCACATGAAGCTTGGTGAGCTTTCTTGCATAGTGGTGTCATCTCCTGAAATGGCTAAAGAGGTGATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCATCTTCTTGCTGCAGAAGTAGTAACTTACGGGTCTAAAGGGATGACTTTTTCTCCATATGGAACCTATTGGAGGCAGATGAGGAAGATTTGTACCATGGAGCTACTAACACCAAAGCGTGTTGAGTCCTTCAGATCTGTCAGAGAAGAAGAATTAGCAAATCTTGTCAAAGACATAATCTTGAGTGAAGGGTCACCTATCAATCTCAGTGAGAAGATTGATTCATTGGCATATGGATTAACATCAAGGACAGCCTTTGGTGCACAAACCAAAGGGAAAGAAGAGTATAGAAAACTCATGAAGGATGTGGTTAAGTTGGCTGGAGGCTTCTCTGTTGCTGATATGTATCCTTCCATTAAGGTTCTTCAAGTTCTTACAGGATTAAGGCGAAAGCTTGAGAAGCTTCATCGTGGAATGGACAAGATACTAGAGAACATTGTAAGAAGTCATATGGAAAAGAATTTGGAGGCAAAGGGAAGTGAAGAAATAGGGGCAGATCTTGTTGATGTTCTTTTGAAGCTACAAAAGCAAACAGATCTGGAACATCCCTTATCGAACATGGTTGTCAAAGCAACAATTATGGATATCTTCAGTGCTGGAAGCGACACCGCATTTACAACTCTAGAGTGGGCAATGTCAGAACTGATCAAAAATCCACATATAATGGAGAAAGCACAAGCTGAGGTTAGAAGGGTCTATAATGAAAAAGGATATGTGGATGAACAAAGTCTTCATGAGCTGAAATATTTGAGGTCAGTTATCAAAGAAACATTGCGTCTACATCCACCTGTTCCATTCTTACTTCCAAGAGAATGCAGTGAGAGATGTGAAATCACTTATAACTCCGGTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold02511	5488	13355	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B11

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur002511s00035432.1	PF00067.17	p450	39	487	2.50E-93
Glyur002511s00035432.1	PF00067.17	p450	545	890	1.10E-63

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.164
SRR1783600	control	6.300
SRR1783602	moderate drought stress	8.315
SRR1811619	moderate drought stress	8.210

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.235
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.984

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	42.668
SRR2868004	Drought Stress(Tissue:root)	84.747
SRR2967015	Control (Tissue:root)	88.936

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	14.184
SRR9715740	Leave	5.268
SRR9715741	Leave	8.305
SRR9715739	Root	2.614
SRR9715742	Root	4.258
SRR9715743	Root	4.754

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.758
SRR8749028	MeJA induced 9h	10.191
SRR8749029	MeJA induced 9h	1.628
SRR8749030	Uninduced	4.966
SRR8749031	Uninduced	18.185
SRR8749032	Uninduced	2.955

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	39.206
SRR8400027	Control-Root	27.912