Gene detail information of Glyur002512s00038136.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51890.1 | 2.00E-111 | Peroxidase superfamily protein |
| NR | AFK46112.1 | 1.15E-166 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9LT91|PER66_ARATH | 1.00E-146 | Peroxidase 66 (Precursor) |
| trEMBL | tr|I3T0S0|I3T0S0_LOTJA | 4.00E-167 | Uncharacterized protein {ECO:0000313|EMBL:AFK46112.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02512 | 6870 | 9878 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00430 | E1.11.1.7 | EC:1.11.1.7 | Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002512s00038136.1 | PF00141.18 | peroxidase | 7 | 244 | 1.70E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.904 |
| SRR1783600 | control | 0.718 |
| SRR1783602 | moderate drought stress | 0.666 |
| SRR1811619 | moderate drought stress | 0.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.789 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.393 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.007 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.436 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.951 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 16.710 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.054 |
| SRR2967015 | Control (Tissue:root) | 6.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.501 |
| SRR9715740 | Leave | 0.043 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 8.725 |
| SRR9715743 | Root | 8.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.641 |
| SRR8400027 | Control-Root | 5.365 |