Gene detail information of Glyur002517s00037494.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08080.11.00E-57alpha carbonic anhydrase 7
NRKEH42156.16.56E-144eukaryotic-type carbonic anhydrase [Medicago truncatula]
COGYP_004152175.11.00E-34Carbonate dehydratase [Thermovibrio ammonificans HB-1]
Swissprottr|Q8L817|ATCA7_ARATH2.00E-69Alpha carbonic anhydrase 7 (Precursor)
trEMBLtr|A0A072VKK0|A0A072VKK0_MEDTR2.00E-144Eukaryotic-type carbonic anhydrase {ECO:0000313|EMBL:KEH42156.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0251721345956-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01674cah EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0006730  one-carbon metabolic process


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002517s00037494.1PF00194.16Carb_anhydrase1042321.50E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.660
SRR1783600control4.782
SRR1783602moderate drought stress1.498
SRR1811619moderate drought stress1.614

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.121
DRR006520Root Summer glycyrrhizin high producing strain0.117
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.208
DRR006526Leaf Summer glycyrrhizin high producing strain0.171

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)84.205
SRR2868004Drought Stress(Tissue:root)49.913
SRR2967015Control (Tissue:root)50.367

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.000
SRR9715741Leave0.073
SRR9715739Root0.000
SRR9715742Root0.442
SRR9715743Root0.615

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h99.649
SRR8749028MeJA induced 9h240.759
SRR8749029MeJA induced 9h111.759
SRR8749030Uninduced249.642
SRR8749031Uninduced112.456
SRR8749032Uninduced115.378

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.230
SRR8400027Control-Root20.931

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved