Gene detail information of Glyur002517s00037498.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08080.15.00E-56alpha carbonic anhydrase 7
NRKHN39018.12.61E-107Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 [Glycine soja]
COGNP_241226.18.00E-26carbonic anhydrase [Bacillus halodurans C-125]
Swissprottr|Q8L817|ATCA7_ARATH2.00E-68Alpha carbonic anhydrase 7 (Precursor)
trEMBLtr|I1L913|I1L913_SOYBN1.00E-107Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G06710.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025172636931032-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01674cah EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0006730  one-carbon metabolic process


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002517s00037498.1PF00194.16Carb_anhydrase291361.60E-16
Glyur002517s00037498.1PF00194.16Carb_anhydrase1401843.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control60.302
SRR1783600control59.461
SRR1783602moderate drought stress18.204
SRR1811619moderate drought stress18.871

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.032
DRR006520Root Summer glycyrrhizin high producing strain17.790
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain7.730
DRR006524Root Summer glycyrrhizin low producing strain8.304
DRR006525Leaf Summer glycyrrhizin high producing strain2.170
DRR006526Leaf Summer glycyrrhizin high producing strain2.347

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.033
SRR2868004Drought Stress(Tissue:root)20.563
SRR2967015Control (Tissue:root)16.451

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.399
SRR9715740Leave0.212
SRR9715741Leave0.624
SRR9715739Root8.190
SRR9715742Root12.483
SRR9715743Root10.686

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h72.718
SRR8749028MeJA induced 9h64.860
SRR8749029MeJA induced 9h93.030
SRR8749030Uninduced152.771
SRR8749031Uninduced81.584
SRR8749032Uninduced89.167

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root53.381
SRR8400027Control-Root39.899

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved