Gene detail information of Glyur002518s00033760.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G26220.12.00E-69Acyl-CoA N-acyltransferases (NAT) superfamily protein
NRXP_004490320.11.33E-114PREDICTED: uncharacterized N-acetyltransferase ycf52-like [Cicer arietinum]
COGYP_007134888.13.00E-33GCN5-related N-acetyltransferase [Stanieria cyanosphaera PCC 7437]
Swissprottr|Q1XDU5|YCF52_PYRYE1.00E-37Uncharacterized N-acetyltransferase ycf52
trEMBLtr|G7ICB6|G7ICB6_MEDTR1.00E-102Uncharacterized protein {ECO:0000313|EMBL:AFK47766.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025182473125315+


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0008080  N-acetyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002518s00033760.1PF00583.19Acetyltransf_11051741.60E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.275
SRR1783600control0.212
SRR1783602moderate drought stress0.625
SRR1811619moderate drought stress0.607

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.556
DRR006520Root Summer glycyrrhizin high producing strain0.612
DRR006521Root Winter glycyrrhizin high producing strain0.378
DRR006522Root Winter glycyrrhizin high producing strain0.372
DRR006523Root Summer glycyrrhizin low producing strain0.371
DRR006524Root Summer glycyrrhizin low producing strain0.262
DRR006525Leaf Summer glycyrrhizin high producing strain9.837
DRR006526Leaf Summer glycyrrhizin high producing strain10.164

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.208
SRR2868004Drought Stress(Tissue:root)1.903
SRR2967015Control (Tissue:root)1.198

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.469
SRR9715740Leave34.614
SRR9715741Leave28.284
SRR9715739Root0.482
SRR9715742Root1.834
SRR9715743Root2.100

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.524
SRR8749028MeJA induced 9h0.465
SRR8749029MeJA induced 9h0.477
SRR8749030Uninduced0.351
SRR8749031Uninduced0.153
SRR8749032Uninduced0.713

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.271
SRR8400027Control-Root3.326

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved