Gene detail information of Glyur002527s00037573.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25860.13.00E-1512-oxoacid dehydrogenases acyltransferase family protein
NRXP_003517978.10PREDICTED: dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like [Glycine max]
COGYP_007091357.16.00E-156hypothetical protein Chro_1978 [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q9SQI8|ODP24_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic (Precursor)
trEMBLtr|I1J6K8|I1J6K8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G20720.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025272278530067-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00627DLAT, aceF, pdhC EC:2.3.1.12 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016746  transferase activity, transferring acyl groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002527s00037573.1PF00364.17Biotin_lipoyl511215.40E-16
Glyur002527s00037573.1PF02817.12E3_binding1832207.10E-14
Glyur002527s00037573.1PF00198.182-oxoacid_dh2635265.50E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.068
SRR1783600control48.384
SRR1783602moderate drought stress23.894
SRR1811619moderate drought stress24.096

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.504
DRR006520Root Summer glycyrrhizin high producing strain26.288
DRR006521Root Winter glycyrrhizin high producing strain8.897
DRR006522Root Winter glycyrrhizin high producing strain8.839
DRR006523Root Summer glycyrrhizin low producing strain17.726
DRR006524Root Summer glycyrrhizin low producing strain17.875
DRR006525Leaf Summer glycyrrhizin high producing strain22.517
DRR006526Leaf Summer glycyrrhizin high producing strain22.581

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)73.030
SRR2868004Drought Stress(Tissue:root)41.514
SRR2967015Control (Tissue:root)38.238

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave28.914
SRR9715740Leave23.191
SRR9715741Leave24.090
SRR9715739Root43.907
SRR9715742Root32.607
SRR9715743Root33.857

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.968
SRR8749028MeJA induced 9h16.741
SRR8749029MeJA induced 9h15.907
SRR8749030Uninduced5.239
SRR8749031Uninduced3.102
SRR8749032Uninduced2.873

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root77.169
SRR8400027Control-Root79.718

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved