Gene detail information of Glyur002531s00038549.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61850.1 | 5.00E-17 | floral meristem identity control protein LEAFY (LFY) |
| NR | AAO64448.1 | 4.11E-19 | AML [Acacia mangium] |
| Swissprot | tr|Q00958|LFY_ARATH | 6.00E-20 | Protein LEAFY |
| trEMBL | tr|Q0GYP2|Q0GYP2_SOYBN | 1.00E-17 | LEAFY-like protein {ECO:0000313|EMBL:ABE02271.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02531 | 4561 | 4776 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | LFY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002531s00038549.1 | PF01698.11 | FLO_LFY | 11 | 71 | 2.00E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.085 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.097 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.097 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.256 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.648 |
| SRR8749028 | MeJA induced 9h | 1.425 |
| SRR8749029 | MeJA induced 9h | 1.580 |
| SRR8749030 | Uninduced | 3.180 |
| SRR8749031 | Uninduced | 2.542 |
| SRR8749032 | Uninduced | 1.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.000 |
| SRR8400027 | Control-Root | 0.054 |