Gene detail information of Glyur002552s00034765.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68670.1 | 9.00E-56 | myb-like transcription factor family protein |
| NR | XP_007153350.1 | 1.24E-170 | hypothetical protein PHAVU_003G028000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9FGT7|ARR18_ARATH | 2.00E-12 | Two-component response regulator ARR18 |
| trEMBL | tr|V7C5E6|V7C5E6_PHAVU | 5.00E-171 | Uncharacterized protein {ECO:0000313|EMBL:ESW25344.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02552 | 25113 | 27551 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
| EAR motif-containing Proteins | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002552s00034765.1 | PF00249.26 | Myb_DNA-binding | 220 | 281 | 2.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.980 |
| SRR1783600 | control | 18.063 |
| SRR1783602 | moderate drought stress | 55.473 |
| SRR1811619 | moderate drought stress | 55.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.423 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.530 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.300 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.660 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.902 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.394 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 28.572 |
| SRR2868004 | Drought Stress(Tissue:root) | 12.678 |
| SRR2967015 | Control (Tissue:root) | 17.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.052 |
| SRR9715740 | Leave | 7.003 |
| SRR9715741 | Leave | 7.452 |
| SRR9715739 | Root | 2.647 |
| SRR9715742 | Root | 14.875 |
| SRR9715743 | Root | 10.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.609 |
| SRR8749028 | MeJA induced 9h | 18.244 |
| SRR8749029 | MeJA induced 9h | 13.950 |
| SRR8749030 | Uninduced | 19.046 |
| SRR8749031 | Uninduced | 40.499 |
| SRR8749032 | Uninduced | 20.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 16.148 |
| SRR8400027 | Control-Root | 26.164 |