Gene detail information of Glyur002555s00043102.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26330.1 | 3.00E-55 | cytochrome P450, family 71, subfamily B, polypeptide 37 |
| NR | KEH29139.1 | 1.06E-108 | cytochrome P450 family 71 protein [Medicago truncatula] |
| COG | YP_001363481.1 | 3.00E-25 | cytochrome P450 [Kineococcus radiotolerans SRS30216 = ATCC BAA-149] |
| Swissprot | tr|P24465|C71A1_PERAE | 4.00E-70 | Cytochrome P450 71A1 |
| trEMBL | tr|A0A072UHA2|A0A072UHA2_MEDTR | 4.00E-109 | Cytochrome P450 family 71 protein {ECO:0000313|EMBL:KEH29139.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02555 | 22017 | 24071 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP71B37 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002555s00043102.1 | PF00067.17 | p450 | 1 | 190 | 5.80E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.559 |
| SRR1783600 | control | 1.675 |
| SRR1783602 | moderate drought stress | 2.359 |
| SRR1811619 | moderate drought stress | 2.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.604 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.669 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.915 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.244 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.070 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.399 |
| SRR9715743 | Root | 2.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.903 |
| SRR8400027 | Control-Root | 1.293 |