Gene detail information of Glyur002557s00031648.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11980.12.00E-112nudix hydrolase homolog 14
NRAES90973.20nudix hydrolase-like protein [Medicago truncatula]
COGYP_001602761.15.00E-18nucleoside diphosphate hydrolase [Gluconacetobacter diazotrophicus PAl 5]
Swissprottr|Q9SZ63|NUD14_ARATH1.00E-139Nudix hydrolase 14, chloroplastic (Precursor)
trEMBLtr|G7JK61|G7JK61_MEDTR0Nudix hydrolase-like protein {ECO:0000313|EMBL:AES90973.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025571808321794-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18447NUDX14 EC:3.6.1.21 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Purine metabolismmap00230


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002557s00031648.1PF00293.23NUDIX1562946.00E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.848
SRR1783600control4.984
SRR1783602moderate drought stress8.635
SRR1811619moderate drought stress8.582

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.311
DRR006520Root Summer glycyrrhizin high producing strain12.145
DRR006521Root Winter glycyrrhizin high producing strain10.852
DRR006522Root Winter glycyrrhizin high producing strain10.167
DRR006523Root Summer glycyrrhizin low producing strain9.885
DRR006524Root Summer glycyrrhizin low producing strain9.759
DRR006525Leaf Summer glycyrrhizin high producing strain15.630
DRR006526Leaf Summer glycyrrhizin high producing strain16.008

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.897
SRR2868004Drought Stress(Tissue:root)12.710
SRR2967015Control (Tissue:root)13.826

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.443
SRR9715740Leave18.880
SRR9715741Leave15.199
SRR9715739Root2.746
SRR9715742Root4.425
SRR9715743Root4.849

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.672
SRR8749028MeJA induced 9h11.550
SRR8749029MeJA induced 9h10.117
SRR8749030Uninduced9.218
SRR8749031Uninduced3.124
SRR8749032Uninduced3.938

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.202
SRR8400027Control-Root13.114

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved