Gene detail information of Glyur002564s00037383.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14210.15.00E-160Leucine-rich repeat protein kinase family protein
NRKHN45327.10Putative inactive leucine-rich repeat receptor-like protein kinase [Glycine soja]
COGYP_004775215.12.00E-25RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q8LFN2|Y3037_ARATH1.00E-121Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 (Precursor)
trEMBLtr|I1K1Z6|I1K1Z6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G15150.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold02564662013309-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.15.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002564s00037383.1PF00560.28LRR_13343540.54
Glyur002564s00037383.1PF13855.1LRR_83934353.60E-07
Glyur002564s00037383.1PF07714.12Pkinase_Tyr6067271.20E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.760
SRR1783600control8.424
SRR1783602moderate drought stress22.171
SRR1811619moderate drought stress22.499

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.461
DRR006520Root Summer glycyrrhizin high producing strain8.014
DRR006521Root Winter glycyrrhizin high producing strain8.105
DRR006522Root Winter glycyrrhizin high producing strain7.762
DRR006523Root Summer glycyrrhizin low producing strain2.166
DRR006524Root Summer glycyrrhizin low producing strain2.031
DRR006525Leaf Summer glycyrrhizin high producing strain3.521
DRR006526Leaf Summer glycyrrhizin high producing strain3.447

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.402
SRR2868004Drought Stress(Tissue:root)0.465
SRR2967015Control (Tissue:root)0.333

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.594
SRR9715740Leave4.022
SRR9715741Leave8.000
SRR9715739Root0.771
SRR9715742Root3.500
SRR9715743Root2.205

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.919
SRR8749028MeJA induced 9h0.597
SRR8749029MeJA induced 9h1.109
SRR8749030Uninduced0.333
SRR8749031Uninduced0.157
SRR8749032Uninduced0.305

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.554
SRR8400027Control-Root13.618

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved