Gene detail information of Glyur002572s00046250.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01020.1 | 2.00E-18 | Protein kinase superfamily protein |
| NR | XP_009410484.1 | 1.57E-19 | PREDICTED: serine/threonine-protein kinase At5g01020-like isoform X2 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8GXZ3|Y5102_ARATH | 7.00E-21 | Serine/threonine-protein kinase At5g01020 |
| trEMBL | tr|M0RME1|M0RME1_MUSAM | 6.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P29170_001} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02572 | 37136 | 38090 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.2.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002572s00046250.1 | PF07714.12 | Pkinase_Tyr | 71 | 112 | 0.00018 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.046 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.070 |
| SRR2967015 | Control (Tissue:root) | 0.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.346 |
| SRR8749028 | MeJA induced 9h | 0.174 |
| SRR8749029 | MeJA induced 9h | 0.229 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.260 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.001 |
| SRR8400027 | Control-Root | 0.006 |