Gene detail information of Glyur002578s00032746.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70530.10cysteine-rich RLK (RECEPTOR-like protein kinase) 3
NRXP_003519826.10PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max]
COGYP_004269132.12.00E-21serine/threonine protein kinase [Planctomyces brasiliensis DSM 5305]
Swissprottr|Q9CAL2|CRK3_ARATH0Cysteine-rich receptor-like protein kinase 3 (Precursor)
trEMBLtr|I1JC52|I1JC52_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04220.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0257862710089+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.7.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002578s00032746.4PF01657.12Stress-antifung451351.10E-15
Glyur002578s00032746.4PF01657.12Stress-antifung1482452.10E-13
Glyur002578s00032746.4PF07714.12Pkinase_Tyr2903432.40E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.068
SRR1783600control4.110
SRR1783602moderate drought stress1.977
SRR1811619moderate drought stress2.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.683
DRR006520Root Summer glycyrrhizin high producing strain6.841
DRR006521Root Winter glycyrrhizin high producing strain1.813
DRR006522Root Winter glycyrrhizin high producing strain1.716
DRR006523Root Summer glycyrrhizin low producing strain21.767
DRR006524Root Summer glycyrrhizin low producing strain21.756
DRR006525Leaf Summer glycyrrhizin high producing strain8.529
DRR006526Leaf Summer glycyrrhizin high producing strain8.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.386
SRR2868004Drought Stress(Tissue:root)2.480
SRR2967015Control (Tissue:root)2.220

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave40.487
SRR9715740Leave34.982
SRR9715741Leave44.871
SRR9715739Root5.095
SRR9715742Root17.955
SRR9715743Root14.728

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h26.850
SRR8749028MeJA induced 9h17.584
SRR8749029MeJA induced 9h13.747
SRR8749030Uninduced10.853
SRR8749031Uninduced1.886
SRR8749032Uninduced1.339

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.231
SRR8400027Control-Root4.249

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved