Gene detail information of Glyur002578s00032747.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G23360.11.00E-101S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRXP_003519807.12.37E-158PREDICTED: 2-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic-like [Glycine max]
COGYP_007107933.14.00E-85demethylmenaquinone methyltransferase [Geitlerinema sp. PCC 7407]
Swissprottr|Q3ED65|MENG_ARATH3.00E-1272-phytyl-1,4-beta-naphthoquinone methyltransferase, chloroplastic (Precursor)
trEMBLtr|I1JC50|I1JC50_SOYBN9.00E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G04200.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025781037421480-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03183ubiE EC:2.1.1.163 2.1.1.201 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

molecular_function

GO:0008168  methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002578s00032747.1PF01209.13Ubie_methyltran402593.80E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.421
SRR1783600control1.406
SRR1783602moderate drought stress1.338
SRR1811619moderate drought stress1.268

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.478
DRR006520Root Summer glycyrrhizin high producing strain4.490
DRR006521Root Winter glycyrrhizin high producing strain1.968
DRR006522Root Winter glycyrrhizin high producing strain1.770
DRR006523Root Summer glycyrrhizin low producing strain2.838
DRR006524Root Summer glycyrrhizin low producing strain2.770
DRR006525Leaf Summer glycyrrhizin high producing strain19.375
DRR006526Leaf Summer glycyrrhizin high producing strain19.085

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.389
SRR2868004Drought Stress(Tissue:root)5.434
SRR2967015Control (Tissue:root)5.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.876
SRR9715740Leave9.749
SRR9715741Leave7.522
SRR9715739Root4.260
SRR9715742Root3.307
SRR9715743Root4.366

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.370
SRR8749028MeJA induced 9h0.819
SRR8749029MeJA induced 9h1.879
SRR8749030Uninduced0.296
SRR8749031Uninduced0.173
SRR8749032Uninduced0.842

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.933
SRR8400027Control-Root9.304

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved