Gene detail information of Glyur002588s00040671.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT4G30340.1 | 1.00E-152 | diacylglycerol kinase 7 |
NR | XP_003552048.1 | 0 | PREDICTED: diacylglycerol kinase 7-like [Glycine max] |
COG | YP_003898503.1 | 6.00E-06 | hypothetical protein HELO_3434 [Halomonas elongata DSM 2581] |
Swissprot | tr|F4JQ95|DGK7_ARATH | 0 | Diacylglycerol kinase 7 |
trEMBL | tr|K7MS66|K7MS66_SOYBN | 0 | Diacylglycerol kinase {ECO:0000256|RuleBase:RU361128} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold02588 | 20087 | 31853 | - |
Gene family
Gene family | subfamily |
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-- | -- |
KEGG pathway
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur002588s00040671.1 | PF00781.19 | DAGK_cat | 82 | 228 | 8.80E-26 |
Glyur002588s00040671.1 | PF00609.14 | DAGK_acc | 274 | 385 | 1.20E-27 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.341 |
SRR1783600 | control | 0.336 |
SRR1783602 | moderate drought stress | 0.327 |
SRR1811619 | moderate drought stress | 0.411 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.092 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.085 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.156 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.156 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 1.542 |
SRR2868004 | Drought Stress(Tissue:root) | 1.423 |
SRR2967015 | Control (Tissue:root) | 1.193 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 0.056 |
SRR9715740 | Leave | 0.000 |
SRR9715741 | Leave | 0.263 |
SRR9715739 | Root | 0.000 |
SRR9715742 | Root | 0.053 |
SRR9715743 | Root | 0.308 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 5.364 |
SRR8749028 | MeJA induced 9h | 25.505 |
SRR8749029 | MeJA induced 9h | 8.914 |
SRR8749030 | Uninduced | 20.086 |
SRR8749031 | Uninduced | 36.690 |
SRR8749032 | Uninduced | 11.504 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.998 |
SRR8400027 | Control-Root | 1.557 |