Gene detail information of Glyur002589s00034647.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G61430.12.00E-56NAC domain containing protein 100
NRXP_007151811.13.62E-90hypothetical protein PHAVU_004G076900g [Phaseolus vulgaris]
Swissprottr|Q9FLJ2|NC100_ARATH1.00E-71NAC domain-containing protein 100
trEMBLtr|V7C3D4|V7C3D4_PHAVU1.00E-90Uncharacterized protein {ECO:0000313|EMBL:ESW23805.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0258920823774+


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002589s00034647.1PF02365.10NAM11162.10E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.077
SRR1783600control9.746
SRR1783602moderate drought stress15.163
SRR1811619moderate drought stress16.116

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.334
DRR006520Root Summer glycyrrhizin high producing strain4.195
DRR006521Root Winter glycyrrhizin high producing strain0.777
DRR006522Root Winter glycyrrhizin high producing strain0.610
DRR006523Root Summer glycyrrhizin low producing strain22.750
DRR006524Root Summer glycyrrhizin low producing strain22.698
DRR006525Leaf Summer glycyrrhizin high producing strain1.641
DRR006526Leaf Summer glycyrrhizin high producing strain1.892

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.687
SRR2868004Drought Stress(Tissue:root)15.222
SRR2967015Control (Tissue:root)16.237

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.463
SRR9715740Leave1.850
SRR9715741Leave2.061
SRR9715739Root1.631
SRR9715742Root25.201
SRR9715743Root21.412

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h98.734
SRR8749028MeJA induced 9h249.123
SRR8749029MeJA induced 9h193.994
SRR8749030Uninduced119.388
SRR8749031Uninduced220.358
SRR8749032Uninduced79.321

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.615
SRR8400027Control-Root18.410

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved