Gene detail information of Glyur002595s00035354.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12900.27.00E-59glyceraldehyde 3-phosphate dehydrogenase A subunit 2
NRXP_002321065.24.04E-109hypothetical protein POPTR_0014s13660g [Populus trichocarpa]
COGYP_007053884.12.00E-79glyceraldehyde 3-phosphate dehydrogenase (NADP+) [Rivularia sp. PCC 7116]
Swissprottr|P19866|G3PA_SPIOL4.00E-97Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor)
trEMBLtr|W5ETI9|W5ETI9_WHEAT9.00E-110Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4DS_E5AD7818A.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025952006720552-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05298GAPA EC:1.2.1.13 Carbon metabolism map01200
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002595s00035354.1PF02800.15Gp_dh_C11396.70E-60


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.358
DRR006520Root Summer glycyrrhizin high producing strain0.273
DRR006521Root Winter glycyrrhizin high producing strain0.452
DRR006522Root Winter glycyrrhizin high producing strain0.275
DRR006523Root Summer glycyrrhizin low producing strain0.735
DRR006524Root Summer glycyrrhizin low producing strain0.625
DRR006525Leaf Summer glycyrrhizin high producing strain1772.048
DRR006526Leaf Summer glycyrrhizin high producing strain1774.699

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.409
SRR2868004Drought Stress(Tissue:root)29.271
SRR2967015Control (Tissue:root)4.872

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1545.192
SRR9715740Leave1930.081
SRR9715741Leave1048.909
SRR9715739Root0.275
SRR9715742Root0.840
SRR9715743Root0.596

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.347
SRR8749028MeJA induced 9h2.151
SRR8749029MeJA induced 9h1.697
SRR8749030Uninduced1.038
SRR8749031Uninduced0.107
SRR8749032Uninduced2.974

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.027
SRR8400027Control-Root4.553

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved