Gene detail information of Glyur002595s00035357.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12900.11.00E-65glyceraldehyde 3-phosphate dehydrogenase A subunit 2
NRXP_004493116.12.18E-96PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [Cicer arietinum]
COGYP_007098105.11.00E-30glyceraldehyde-3-phosphate dehydrogenase, type I [Chamaesiphon minutus PCC 6605]
Swissprottr|P12858|G3PA_PEA1.00E-92Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor)
trEMBLtr|I1ML66|I1ML66_SOYBN5.00E-94Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold025952295324275-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05298GAPA EC:1.2.1.13 Carbon metabolism map01200
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002595s00035357.1PF00044.19Gp_dh_N701554.10E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.000
SRR1783600control0.000
SRR1783602moderate drought stress0.000
SRR1811619moderate drought stress0.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.174
DRR006520Root Summer glycyrrhizin high producing strain0.177
DRR006521Root Winter glycyrrhizin high producing strain0.091
DRR006522Root Winter glycyrrhizin high producing strain0.089
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain802.399
DRR006526Leaf Summer glycyrrhizin high producing strain795.601

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.347
SRR2868004Drought Stress(Tissue:root)18.419
SRR2967015Control (Tissue:root)2.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave571.456
SRR9715740Leave811.760
SRR9715741Leave513.731
SRR9715739Root0.162
SRR9715742Root1.778
SRR9715743Root0.494

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.172
SRR8749028MeJA induced 9h2.433
SRR8749029MeJA induced 9h1.306
SRR8749030Uninduced0.861
SRR8749031Uninduced0.000
SRR8749032Uninduced2.214

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.834
SRR8400027Control-Root5.530

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved