Gene detail information of Glyur002595s00035357.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G12900.1 | 1.00E-65 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 |
NR | XP_004493116.1 | 2.18E-96 | PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [Cicer arietinum] |
COG | YP_007098105.1 | 1.00E-30 | glyceraldehyde-3-phosphate dehydrogenase, type I [Chamaesiphon minutus PCC 6605] |
Swissprot | tr|P12858|G3PA_PEA | 1.00E-92 | Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Precursor) |
trEMBL | tr|I1ML66|I1ML66_SOYBN | 5.00E-94 | Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold02595 | 22953 | 24275 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K05298 | GAPA | EC:1.2.1.13 | Carbon metabolism | map01200 |
Carbon fixation in photosynthetic organisms | map00710 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur002595s00035357.1 | PF00044.19 | Gp_dh_N | 70 | 155 | 4.10E-24 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.000 |
SRR1783600 | control | 0.000 |
SRR1783602 | moderate drought stress | 0.000 |
SRR1811619 | moderate drought stress | 0.000 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.174 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.177 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.091 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.089 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 802.399 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 795.601 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 14.347 |
SRR2868004 | Drought Stress(Tissue:root) | 18.419 |
SRR2967015 | Control (Tissue:root) | 2.921 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 571.456 |
SRR9715740 | Leave | 811.760 |
SRR9715741 | Leave | 513.731 |
SRR9715739 | Root | 0.162 |
SRR9715742 | Root | 1.778 |
SRR9715743 | Root | 0.494 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 7.172 |
SRR8749028 | MeJA induced 9h | 2.433 |
SRR8749029 | MeJA induced 9h | 1.306 |
SRR8749030 | Uninduced | 0.861 |
SRR8749031 | Uninduced | 0.000 |
SRR8749032 | Uninduced | 2.214 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 6.834 |
SRR8400027 | Control-Root | 5.530 |