Gene detail information of Glyur002597s00038051.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G14660.18.00E-86cytochrome P450, family 72, subfamily A, polypeptide 13
NRBAL45208.10cytochrome P450 monooxygenase [Glycyrrhiza uralensis]
COGYP_003706560.17.00E-23cytochrome P450 [Truepera radiovictrix DSM 17093]
Swissprottr|H1A988|C7254_GLYUR1.00E-10411-oxo-beta-amyrin 30-oxidase
trEMBLtr|H1A989|H1A989_GLYUR0Cytochrome P450 monooxygenase {ECO:0000313|EMBL:BAL45208.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0259737676104-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP72A13


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur002597s00038051.1PF00067.17p45031813.20E-09
Glyur002597s00038051.1PF00067.17p4501772724.90E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control29.642
SRR1783600control28.820
SRR1783602moderate drought stress33.626
SRR1811619moderate drought stress33.853

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain832.765
DRR006520Root Summer glycyrrhizin high producing strain825.132
DRR006521Root Winter glycyrrhizin high producing strain0.922
DRR006522Root Winter glycyrrhizin high producing strain0.900
DRR006523Root Summer glycyrrhizin low producing strain80.414
DRR006524Root Summer glycyrrhizin low producing strain81.165
DRR006525Leaf Summer glycyrrhizin high producing strain3.948
DRR006526Leaf Summer glycyrrhizin high producing strain3.751

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.581
SRR2868004Drought Stress(Tissue:root)11.552
SRR2967015Control (Tissue:root)13.762

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.390
SRR9715740Leave0.243
SRR9715741Leave0.402
SRR9715739Root6.742
SRR9715742Root31.698
SRR9715743Root30.511

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.065
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.311

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.539
SRR8400027Control-Root9.955

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved