Gene detail information of Glyur002599s00039034.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01900.1 | 5.00E-67 | cytochrome P450, family 94, subfamily B, polypeptide 2 |
| NR | KEH22037.1 | 4.53E-138 | cytochrome P450 family protein [Medicago truncatula] |
| COG | YP_003534112.1 | 1.00E-10 | cytochrome P450 [Haloferax volcanii DS2] |
| Swissprot | tr|Q9SMP5|C94B3_ARATH | 3.00E-84 | Cytochrome P450 94B3 |
| trEMBL | tr|A0A072TX78|A0A072TX78_MEDTR | 2.00E-138 | Cytochrome P450 family protein {ECO:0000313|EMBL:KEH22037.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold02599 | 36855 | 37718 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP94B2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur002599s00039034.1 | PF00067.17 | p450 | 43 | 287 | 3.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.064 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.511 |
| SRR2967015 | Control (Tissue:root) | 2.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.143 |
| SRR9715740 | Leave | 0.007 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.165 |
| SRR8749028 | MeJA induced 9h | 0.005 |
| SRR8749029 | MeJA induced 9h | 0.214 |
| SRR8749030 | Uninduced | 0.311 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.009 |
| SRR8400027 | Control-Root | 0.099 |